RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SEC6P32844 805 aa-1□□□□□ -2.57
snR40snR40 MNN2P38069 597 aa-1□□□□□ -2.57
snR40snR40 AKL1P38080 1108 aaKnown RBP-1□□□□□ -2.57
snR40snR40 PIH1P38768 344 aa-1□□□□□ -2.57
snR40snR40 MNN1P39106 762 aa-1□□□□□ -2.57
snR40snR40 SPO1P53541 631 aa-1□□□□□ -2.57
snR40snR40 HEL2Q05580 639 aaKnown RBP-1□□□□□ -2.57
snR40snR40 CRT10Q08226 957 aa-1□□□□□ -2.57
snR40snR40 GET3Q12154 354 aaKnown RBP-1□□□□□ -2.57
snR40snR40 FRT1Q99332 602 aa-1□□□□□ -2.57
snR40snR40 PCK1P10963 549 aa-1.01□□□□□ -2.57
snR40snR40 WHI2P12611 486 aa-1.01□□□□□ -2.57
snR40snR40 HNM1P19807 563 aa-1.01□□□□□ -2.57
snR40snR40 MSH1P25846 959 aa-1.01□□□□□ -2.57
snR40snR40 MSS1P32559 526 aaPredicted RBP-1.01□□□□□ -2.57
snR40snR40 AFR1P33304 620 aa-1.01□□□□□ -2.57
snR40snR40 HCS1P34243 683 aa-1.01□□□□□ -2.57
snR40snR40 YKL107WP34251 309 aa-1.01□□□□□ -2.57
snR40snR40 JSN1P47135 1091 aaKnown RBP RIP-Chip data-1.01□□□□□ -2.57not detected
snR40snR40 MTR3P48240 250 aaPredicted RBP-1.01□□□□□ -2.57
snR40snR40 ARG5,6Q01217 863 aa-1.01□□□□□ -2.57
snR40snR40 KAR5Q04746 504 aa-1.01□□□□□ -2.57
snR40snR40 HRD3Q05787 833 aa-1.01□□□□□ -2.57
snR40snR40 THI22Q06490 572 aa-1.01□□□□□ -2.57
snR40snR40 YOR022CQ12204 715 aa-1.01□□□□□ -2.57
snR40snR40 BI2P03873 423 aa-1.02□□□□□ -2.57
snR40snR40 GCR1P07261 785 aa-1.02□□□□□ -2.57
snR40snR40 TRL1P09880 827 aaKnown RBP-1.02□□□□□ -2.57
snR40snR40 SEC18P18759 758 aaKnown RBP-1.02□□□□□ -2.57
snR40snR40 CNA1P23287 553 aa-1.02□□□□□ -2.57
snR40snR40 PRE9P23638 258 aaKnown RBP-1.02□□□□□ -2.57
snR40snR40 MOT2P34909 587 aaKnown RBP-1.02□□□□□ -2.57
snR40snR40 ELF1P36053 145 aa-1.02□□□□□ -2.57
snR40snR40 COS111P38308 924 aa-1.02□□□□□ -2.57
snR40snR40 YJL132WP47014 750 aa-1.02□□□□□ -2.57
snR40snR40 SNU56Q03782 492 aaKnown RBP-1.02□□□□□ -2.57
snR40snR40 ECM22Q05958 814 aaPredicted RBP-1.02□□□□□ -2.57
snR40snR40 MCM21Q06675 368 aa-1.02□□□□□ -2.57
snR40snR40 OXR1Q08952 273 aa-1.02□□□□□ -2.57
snR40snR40 PHO4P07270 312 aaKnown RBP-1.03□□□□□ -2.57
snR40snR40 NAM2P11325 894 aa-1.03□□□□□ -2.57
snR40snR40 INO1P11986 533 aa-1.03□□□□□ -2.57
snR40snR40 POL3P15436 1097 aa-1.03□□□□□ -2.57
snR40snR40 CYS3P31373 394 aaKnown RBP-1.03□□□□□ -2.57
snR40snR40 TY4A-JP47023 414 aa-1.03□□□□□ -2.57
snR40snR40 RFX1P48743 811 aa-1.03□□□□□ -2.57
snR40snR40 PSP1P50896 841 aaKnown RBP-1.03□□□□□ -2.57
snR40snR40 HMO1Q03973 246 aaKnown RBP-1.03□□□□□ -2.57
snR40snR40 COG8Q04632 607 aa-1.03□□□□□ -2.57
snR40snR40 YMR254CQ04838 102 aa-1.03□□□□□ -2.57
snR40snR40 DUS3Q06053 668 aaKnown RBP-1.03□□□□□ -2.57
snR40snR40 PFA4Q12006 378 aa-1.03□□□□□ -2.57
snR40snR40 MCD1Q12158 566 aa-1.03□□□□□ -2.57
snR40snR40 RRI1Q12468 440 aa-1.03□□□□□ -2.57
snR40snR40 RNR1P21524 888 aaKnown RBP-1.04□□□□□ -2.58
snR40snR40 MAK32P23060 363 aa-1.04□□□□□ -2.58
snR40snR40 RAD27P26793 382 aa-1.04□□□□□ -2.58
snR40snR40 YJU2P28320 278 aaPredicted RBP-1.04□□□□□ -2.58
snR40snR40 NTH1P32356 751 aa-1.04□□□□□ -2.58
snR40snR40 APT2P36973 181 aa-1.04□□□□□ -2.58
snR40snR40 RTS1P38903 757 aa-1.04□□□□□ -2.58
snR40snR40 YDL073WQ07454 984 aa-1.04□□□□□ -2.58
snR40snR40 THI21Q08975 551 aa-1.04□□□□□ -2.58
snR40snR40 TOP3P13099 656 aa-1.05□□□□□ -2.58
snR40snR40 GAL11P19659 1081 aa-1.05□□□□□ -2.58
snR40snR40 ISY1P21374 235 aaPredicted RBP-1.05□□□□□ -2.58
snR40snR40 FEN2P25621 512 aaKnown RBP-1.05□□□□□ -2.58
snR40snR40 LYP1P32487 611 aa-1.05□□□□□ -2.58
snR40snR40 IME2P32581 645 aa-1.05□□□□□ -2.58
snR40snR40 LOS1P33418 1100 aaPredicted RBP-1.05□□□□□ -2.58
snR40snR40 RIM2P38127 377 aa-1.05□□□□□ -2.58
snR40snR40 IMD2P38697 523 aaKnown RBP-1.05□□□□□ -2.58
snR40snR40 MDM31P38880 579 aa-1.05□□□□□ -2.58
snR40snR40 ATG27P46989 271 aa-1.05□□□□□ -2.58
snR40snR40 NOP9P47077 666 aaKnown RBP-1.05□□□□□ -2.58
snR40snR40 IMD3P50095 523 aaKnown RBP-1.05□□□□□ -2.58
snR40snR40 TSA2Q04120 196 aa-1.05□□□□□ -2.58
snR40snR40 CAN1P04817 590 aa-1.06□□□□□ -2.58
snR40snR40 ILS1P09436 1072 aaKnown RBP-1.06□□□□□ -2.58
snR40snR40 BAR1P12630 587 aa-1.06□□□□□ -2.58
snR40snR40 ARO2P28777 376 aaKnown RBP-1.06□□□□□ -2.58
snR40snR40 RAD24P32641 659 aa-1.06□□□□□ -2.58
snR40snR40 SHP1P34223 423 aa-1.06□□□□□ -2.58
snR40snR40 UTH1P36135 365 aa-1.06□□□□□ -2.58
snR40snR40 FTH1P38310 465 aa-1.06□□□□□ -2.58
snR40snR40 YHR131CP38835 850 aa-1.06□□□□□ -2.58
snR40snR40 CHS6P40955 746 aa-1.06□□□□□ -2.58
snR40snR40 CIN1P40987 1014 aa-1.06□□□□□ -2.58
snR40snR40 MRPS18P42847 217 aa-1.06□□□□□ -2.58
snR40snR40 YIP4P53093 235 aa-1.06□□□□□ -2.58
snR40snR40 YNL144CP53907 740 aa-1.06□□□□□ -2.58
snR40snR40 NUT2Q06213 157 aa-1.06□□□□□ -2.58
snR40snR40 PRC1P00729 532 aa-1.07□□□□□ -2.58
snR40snR40 TRP2P00899 507 aaKnown RBP-1.07□□□□□ -2.58
snR40snR40 YCR061WP25639 631 aa-1.07□□□□□ -2.58
snR40snR40 YDL186WP48568 277 aa-1.07□□□□□ -2.58
snR40snR40 NBP1P52919 319 aaPredicted RBP-1.07□□□□□ -2.58
snR40snR40 BTN2P53286 410 aa-1.07□□□□□ -2.58
snR40snR40 GFD1Q04839 188 aaKnown RBP-1.07□□□□□ -2.58
snR40snR40 PNO1Q99216 274 aaKnown RBP-1.07□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms