RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YFT2	Q06676	274 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	RKI1	Q12189	258 aa		3.09	□□□□□ -1.91
YPR039W	YPR039W	PGK1	P00560	416 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	RPS17A	P02407	136 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	RPS17B	P14127	136 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	IME1	P21190	360 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	APN1	P22936	367 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	SEC65	P29478	273 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	ELF1	P36053	145 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	APL3	P38065	1025 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	BRN1	P38170	754 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	HXT6	P39003	570 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	HXT7	P39004	570 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	OAF1	P39720	1047 aa	Predicted RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	BUD8	P41698	603 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	PXA1	P41909	870 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	MNN11	P46985	422 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	NET1	P47035	1189 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	YGR237C	P50089	785 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	GPG1	P53130	126 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	NOP15	P53927	220 aa	Predicted RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	YHM2	Q04013	314 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	YSH1	Q06224	779 aa	Predicted RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	BMS1	Q08965	1183 aa	Known RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	FAP7	Q12055	197 aa	Predicted RBP	3.08	□□□□□ -1.92
YPR039W	YPR039W	ULA1	Q12059	462 aa		3.08	□□□□□ -1.92
YPR039W	YPR039W	OAF3	P36023	863 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	DID4	P36108	232 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	DUN1	P39009	513 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	GPP1	P41277	250 aa	Known RBP	3.07	□□□□□ -1.92
YPR039W	YPR039W	SNF12	P53628	566 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	PTA1	Q01329	785 aa	Predicted RBP	3.07	□□□□□ -1.92
YPR039W	YPR039W	PPN1	Q04119	674 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	STP4	Q07351	490 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	HFI1	Q12060	488 aa		3.07	□□□□□ -1.92
YPR039W	YPR039W	TPK2	P06245	380 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	IES1	P43579	692 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	TAF4	P50105	388 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	SPO1	P53541	631 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	YDR179W-A	Q03983	463 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	ARG7	Q04728	441 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	RGT2	Q12300	763 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	APM4	Q99186	491 aa		3.06	□□□□□ -1.92
YPR039W	YPR039W	RPS21A	P0C0V8	87 aa	Known RBP	3.05	□□□□□ -1.92
YPR039W	YPR039W	GLN4	P13188	809 aa	Known RBP	3.05	□□□□□ -1.92
YPR039W	YPR039W	FAT1	P38225	669 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	YGL081W	P53156	320 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	NSE5	Q03718	556 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	TRS23	Q03784	219 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	UFO1	Q04511	668 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	IZH3	Q07959	543 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	AIM44	Q99299	758 aa		3.05	□□□□□ -1.92
YPR039W	YPR039W	STE4	P18851	423 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	MBR1	P23493	339 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	AAD3	P25612	363 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	PRE4	P30657	266 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	HOT13	P36078	116 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	VID28	P40547	921 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	PIP2	P52960	996 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	SCS3	P53012	380 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	FDC1	Q03034	503 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	NGL2	Q03264	515 aa	Known RBP	3.04	□□□□□ -1.92
YPR039W	YPR039W	AI5_ALPHA	Q9ZZX1	630 aa		3.04	□□□□□ -1.92
YPR039W	YPR039W	YHR033W	P38690	423 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	UBP12	P39538	1254 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	TMN3	P40071	706 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	LTP1	P40347	161 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	YGL117W	P53133	265 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	FRE7	Q12333	620 aa		3.03	□□□□□ -1.92
YPR039W	YPR039W	CDC26	P14724	124 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	TUP1	P16649	713 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.02	□□□□□ -1.93	not detected
YPR039W	YPR039W	MF(ALPHA)2	P32435	120 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	CDS1	P38221	457 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	CRG1	P38892	291 aa	RIP-Chip data	3.02	□□□□□ -1.93	not detected
YPR039W	YPR039W	FTR1	P40088	404 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	PRM2	P40534	656 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	DUG1	P43616	481 aa	Known RBP	3.02	□□□□□ -1.93
YPR039W	YPR039W	ENP2	P48234	707 aa	Known RBP	3.02	□□□□□ -1.93
YPR039W	YPR039W	MPS1	P54199	764 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	DAK1	P54838	584 aa	Known RBP	3.02	□□□□□ -1.93
YPR039W	YPR039W	HLR1	Q04429	423 aa		3.02	□□□□□ -1.93
YPR039W	YPR039W	DGR2	P32330	852 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	DAL3	P32459	195 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	PPE1	P38796	400 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	THI6	P41835	540 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	BPL1	P48445	690 aa	Predicted RBP	3.01	□□□□□ -1.93
YPR039W	YPR039W	RNR4	P49723	345 aa	Known RBP	3.01	□□□□□ -1.93
YPR039W	YPR039W	YGR054W	P53235	642 aa	Known RBP	3.01	□□□□□ -1.93
YPR039W	YPR039W	TIM50	Q02776	476 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	CEF1	Q03654	590 aa	Predicted RBP	3.01	□□□□□ -1.93
YPR039W	YPR039W	GEP3	Q08622	556 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	CIR2	Q08822	631 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.01	□□□□□ -1.93	not detected
YPR039W	YPR039W	RMP1	Q12530	201 aa		3.01	□□□□□ -1.93
YPR039W	YPR039W	EUG1	P32474	517 aa		3	□□□□□ -1.93
YPR039W	YPR039W	MTC7	P32633	139 aa		3	□□□□□ -1.93
YPR039W	YPR039W	MRPL7	P36519	292 aa		3	□□□□□ -1.93
YPR039W	YPR039W	YEL025C	P39991	1188 aa		3	□□□□□ -1.93
YPR039W	YPR039W	YEN1	P40028	759 aa		3	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms