RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W VID27P40157 782 aa4.47□□□□□ -1.69
HSH49YOR319W GAD1Q04792 585 aa4.47□□□□□ -1.69
HSH49YOR319W PYC1P11154 1178 aaKnown RBP4.46□□□□□ -1.7
HSH49YOR319W DGR2P32330 852 aa4.46□□□□□ -1.7
HSH49YOR319W PET127P32606 800 aa4.46□□□□□ -1.7
HSH49YOR319W TAF5P38129 798 aa4.46□□□□□ -1.7
HSH49YOR319W EAF5P39995 279 aa4.46□□□□□ -1.7
HSH49YOR319W IML2P47031 731 aa4.46□□□□□ -1.7
HSH49YOR319W PRP31P49704 494 aaPredicted RBP4.46□□□□□ -1.7
HSH49YOR319W NSE5Q03718 556 aa4.46□□□□□ -1.7
HSH49YOR319W YPS7Q06325 596 aa4.46□□□□□ -1.7
HSH49YOR319W MCM21Q06675 368 aa4.46□□□□□ -1.7
HSH49YOR319W MRH1Q12117 320 aaPredicted RBP4.46□□□□□ -1.7
HSH49YOR319W YEL076C-AP0CX16 216 aa4.45□□□□□ -1.7
HSH49YOR319W YLR464WP0CX17 216 aa4.45□□□□□ -1.7
HSH49YOR319W MSH1P25846 959 aa4.45□□□□□ -1.7
HSH49YOR319W RPN12P32496 274 aa4.45□□□□□ -1.7
HSH49YOR319W TGL1P34163 548 aa4.45□□□□□ -1.7
HSH49YOR319W APL2P36000 726 aaPredicted RBP4.45□□□□□ -1.7
HSH49YOR319W BCD1P38772 366 aa4.45□□□□□ -1.7
HSH49YOR319W YEL076CP39971 216 aa4.45□□□□□ -1.7
HSH49YOR319W FMP52P40008 231 aa4.45□□□□□ -1.7
HSH49YOR319W RPT2P40327 437 aaKnown RBP4.45□□□□□ -1.7
HSH49YOR319W HOS4P40480 1083 aa4.45□□□□□ -1.7
HSH49YOR319W TEX1P53851 422 aaKnown RBP4.45□□□□□ -1.7
HSH49YOR319W GTR1Q00582 310 aa4.45□□□□□ -1.7
HSH49YOR319W ARG5,6Q01217 863 aa4.45□□□□□ -1.7
HSH49YOR319W REC102Q02721 264 aa4.45□□□□□ -1.7
HSH49YOR319W HMO1Q03973 246 aaKnown RBP4.45□□□□□ -1.7
HSH49YOR319W BLS1Q06071 122 aa4.45□□□□□ -1.7
HSH49YOR319W ISA1Q07821 250 aaPredicted RBP4.45□□□□□ -1.7
HSH49YOR319W VHS3Q08438 674 aa4.45□□□□□ -1.7
HSH49YOR319W SGO1Q08490 590 aa4.45□□□□□ -1.7
HSH49YOR319W SSP2Q08646 371 aa4.45□□□□□ -1.7
HSH49YOR319W VPS5Q92331 675 aa4.45□□□□□ -1.7
HSH49YOR319W CDC43P18898 376 aa4.44□□□□□ -1.7
HSH49YOR319W IME1P21190 360 aa4.44□□□□□ -1.7
HSH49YOR319W ADE2P21264 571 aaKnown RBP4.44□□□□□ -1.7
HSH49YOR319W UBC11P52492 156 aa4.44□□□□□ -1.7
HSH49YOR319W SSL2Q00578 843 aa4.44□□□□□ -1.7
HSH49YOR319W TRS130Q03660 1102 aa4.44□□□□□ -1.7
HSH49YOR319W PPN1Q04119 674 aa4.44□□□□□ -1.7
HSH49YOR319W HIM1Q06674 414 aa4.44□□□□□ -1.7
HSH49YOR319W OPY2Q06810 360 aa4.44□□□□□ -1.7
HSH49YOR319W STP4Q07351 490 aa4.44□□□□□ -1.7
HSH49YOR319W NEW1Q08972 1196 aaKnown RBP4.44□□□□□ -1.7
HSH49YOR319W ERG20P08524 352 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W FRS1P15624 595 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W RPA135P22138 1203 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W APM3P38153 483 aa4.43□□□□□ -1.7
HSH49YOR319W CBR1P38626 284 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W YLF2P38746 405 aa4.43□□□□□ -1.7
HSH49YOR319W REV7P38927 245 aa4.43□□□□□ -1.7
HSH49YOR319W SWD1P39706 426 aa4.43□□□□□ -1.7
HSH49YOR319W SCS2P40075 244 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W BAP3P41815 604 aa4.43□□□□□ -1.7
HSH49YOR319W ERR3P42222 437 aa4.43□□□□□ -1.7
HSH49YOR319W TAF4P50105 388 aa4.43□□□□□ -1.7
HSH49YOR319W TEL2P53038 688 aa4.43□□□□□ -1.7
HSH49YOR319W MOT3P54785 490 aaKnown RBP4.43□□□□□ -1.7
HSH49YOR319W RRI2Q12348 645 aa4.43□□□□□ -1.7
HSH49YOR319W SSM4P40318 1319 aa4.43□□□□□ -1.7
HSH49YOR319W VAS1P07806 1104 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W ADH4P10127 382 aa4.42□□□□□ -1.7
HSH49YOR319W GFA1P14742 717 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W HSC82P15108 705 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W SEC18P18759 758 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W KIN3P22209 435 aa4.42□□□□□ -1.7
HSH49YOR319W PSY4P38193 441 aa4.42□□□□□ -1.7
HSH49YOR319W PPE1P38796 400 aa4.42□□□□□ -1.7
HSH49YOR319W NOC2P39744 710 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W RAD26P40352 1085 aa4.42□□□□□ -1.7
HSH49YOR319W MNT2P53059 558 aa4.42□□□□□ -1.7
HSH49YOR319W YAP1802P53309 568 aa4.42□□□□□ -1.7
HSH49YOR319W RCR2Q03446 210 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W CTK1Q03957 528 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W VBA4Q04602 768 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W EIS1Q05050 843 aaKnown RBP4.42□□□□□ -1.7
HSH49YOR319W CIA1Q05583 330 aa4.42□□□□□ -1.7
HSH49YOR319W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
HSH49YOR319W CBP3P21560 335 aa4.41□□□□□ -1.7
HSH49YOR319W PRP22P24384 1145 aaKnown RBP4.41□□□□□ -1.7
HSH49YOR319W CCT3P39077 534 aaKnown RBP4.41□□□□□ -1.7
HSH49YOR319W SPC72P39723 622 aa4.41□□□□□ -1.7
HSH49YOR319W IMA5P40884 581 aa4.41□□□□□ -1.7
HSH49YOR319W MAD2P40958 196 aa4.41□□□□□ -1.7
HSH49YOR319W PXA1P41909 870 aa4.41□□□□□ -1.7
HSH49YOR319W MAD3P47074 515 aa4.41□□□□□ -1.7
HSH49YOR319W PEF1P53238 335 aa4.41□□□□□ -1.7
HSH49YOR319W SPO1P53541 631 aa4.41□□□□□ -1.7
HSH49YOR319W CPR6P53691 371 aaKnown RBP4.41□□□□□ -1.7
HSH49YOR319W TRI1Q05024 226 aa4.41□□□□□ -1.7
HSH49YOR319W RTK1Q12100 620 aaPredicted RBP4.41□□□□□ -1.7
HSH49YOR319W PHO5P00635 467 aa4.4□□□□□ -1.71
HSH49YOR319W GFD2P25370 566 aaKnown RBP4.4□□□□□ -1.71
HSH49YOR319W YCL049CP25577 312 aa4.4□□□□□ -1.71
HSH49YOR319W MCM10P32354 571 aa4.4□□□□□ -1.71
HSH49YOR319W BEM3P32873 1128 aa4.4□□□□□ -1.71
HSH49YOR319W YPT7P32939 208 aa4.4□□□□□ -1.71
HSH49YOR319W XRS2P33301 854 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms