RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W SPO14P36126 1683 aa4.14□□□□□ -1.75
VPS17YOR132W ERG20P08524 352 aaKnown RBP4.14□□□□□ -1.75
VPS17YOR132W PET127P32606 800 aa4.14□□□□□ -1.75
VPS17YOR132W CCT5P40413 562 aaKnown RBP4.14□□□□□ -1.75
VPS17YOR132W GZF3P42944 551 aaKnown RBP4.14□□□□□ -1.75
VPS17YOR132W YGR153WP48238 217 aa4.14□□□□□ -1.75
VPS17YOR132W SMX3P54999 86 aaPredicted RBP4.14□□□□□ -1.75
VPS17YOR132W HFD1Q04458 532 aa4.14□□□□□ -1.75
VPS17YOR132W THI22Q06490 572 aa4.14□□□□□ -1.75
VPS17YOR132W TAD3Q9URQ3 322 aa4.14□□□□□ -1.75
VPS17YOR132W BUD3P25558 1636 aa4.14□□□□□ -1.75
VPS17YOR132W SPT7P35177 1332 aa4.14□□□□□ -1.75
VPS17YOR132W KAR1P11927 433 aa4.13□□□□□ -1.75
VPS17YOR132W FRS1P15624 595 aaKnown RBP4.13□□□□□ -1.75
VPS17YOR132W KIN3P22209 435 aa4.13□□□□□ -1.75
VPS17YOR132W PRP28P23394 588 aa4.13□□□□□ -1.75
VPS17YOR132W IMG2P25642 146 aaPredicted RBP4.13□□□□□ -1.75
VPS17YOR132W PIG2P40187 538 aa4.13□□□□□ -1.75
VPS17YOR132W ARG2P40360 574 aa4.13□□□□□ -1.75
VPS17YOR132W NDC80P40460 691 aa4.13□□□□□ -1.75
VPS17YOR132W YGR237CP50089 785 aa4.13□□□□□ -1.75
VPS17YOR132W YLR407WQ06070 228 aa4.13□□□□□ -1.75
VPS17YOR132W BRE1Q07457 700 aaKnown RBP4.13□□□□□ -1.75
VPS17YOR132W YTM1Q12024 460 aaPredicted RBP4.13□□□□□ -1.75
VPS17YOR132W POM34Q12445 299 aa4.13□□□□□ -1.75
VPS17YOR132W GCN2P15442 1659 aa4.13□□□□□ -1.75
VPS17YOR132W YRF1-1P0CX20 1796 aa4.13□□□□□ -1.75
VPS17YOR132W YRF1-5P0CX21 1796 aa4.13□□□□□ -1.75
VPS17YOR132W YRF1-8P0CX22 1796 aa4.13□□□□□ -1.75
VPS17YOR132W SEC15P22224 910 aa4.13□□□□□ -1.75
VPS17YOR132W BCS1P32839 456 aa4.13□□□□□ -1.75
VPS17YOR132W BIT2P38346 545 aa4.13□□□□□ -1.75
VPS17YOR132W CTR1P49573 406 aa4.13□□□□□ -1.75
VPS17YOR132W ATG4P53867 494 aa4.13□□□□□ -1.75
VPS17YOR132W RGC1Q06108 1083 aaKnown RBP4.13□□□□□ -1.75
VPS17YOR132W MLH3Q12083 715 aa4.13□□□□□ -1.75
VPS17YOR132W NUP157P40064 1391 aaKnown RBP4.12□□□□□ -1.75
VPS17YOR132W YSP2Q06681 1438 aa4.12□□□□□ -1.75
VPS17YOR132W SWI6P09959 803 aa4.12□□□□□ -1.75
VPS17YOR132W KIN82P25341 720 aa4.12□□□□□ -1.75
VPS17YOR132W DMC1P25453 334 aa4.12□□□□□ -1.75
VPS17YOR132W YKU70P32807 602 aa4.12□□□□□ -1.75
VPS17YOR132W FUI1P38196 639 aa4.12□□□□□ -1.75
VPS17YOR132W FOL1P53848 824 aa4.12□□□□□ -1.75
VPS17YOR132W VBA4Q04602 768 aaKnown RBP4.12□□□□□ -1.75
VPS17YOR132W VPS36Q06696 566 aa4.12□□□□□ -1.75
VPS17YOR132W FAP7Q12055 197 aaPredicted RBP4.12□□□□□ -1.75
VPS17YOR132W GFA1P14742 717 aaKnown RBP4.11□□□□□ -1.75
VPS17YOR132W THR1P17423 357 aaKnown RBP4.11□□□□□ -1.75
VPS17YOR132W YPT7P32939 208 aa4.11□□□□□ -1.75
VPS17YOR132W VPS24P36095 224 aaKnown RBP4.11□□□□□ -1.75
VPS17YOR132W DID4P36108 232 aa4.11□□□□□ -1.75
VPS17YOR132W GLG1P36143 616 aa4.11□□□□□ -1.75
VPS17YOR132W YJL206CP39529 758 aa4.11□□□□□ -1.75
VPS17YOR132W ERP2P39704 215 aa4.11□□□□□ -1.75
VPS17YOR132W MNN11P46985 422 aaKnown RBP4.11□□□□□ -1.75
VPS17YOR132W BIT61P47041 543 aa4.11□□□□□ -1.75
VPS17YOR132W GPG1P53130 126 aa4.11□□□□□ -1.75
VPS17YOR132W ECM9Q02202 377 aa4.11□□□□□ -1.75
VPS17YOR132W TMA64Q04600 565 aaKnown RBP4.11□□□□□ -1.75
VPS17YOR132W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.11□□□□□ -1.75not detected
VPS17YOR132W ABF1P14164 731 aa4.1□□□□□ -1.75
VPS17YOR132W PRP22P24384 1145 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W FEN2P25621 512 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W PWP2P25635 923 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W SEC65P29478 273 aa4.1□□□□□ -1.75
VPS17YOR132W MPE1P35728 441 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W HXT6P39003 570 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W HXT7P39004 570 aa4.1□□□□□ -1.75
VPS17YOR132W OAF1P39720 1047 aaPredicted RBP4.1□□□□□ -1.75
VPS17YOR132W GPP1P41277 250 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W CHS5Q12114 671 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W USV1Q12132 391 aa4.1□□□□□ -1.75
VPS17YOR132W IQG1Q12280 1495 aa4.1□□□□□ -1.75
VPS17YOR132W RPS9BP05755 195 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W HCA4P20448 770 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W TRX2P22803 104 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W PAF1P38351 445 aa4.1□□□□□ -1.75
VPS17YOR132W VPS73P53142 486 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W PEX8P53248 589 aa4.1□□□□□ -1.75
VPS17YOR132W PTA1Q01329 785 aaPredicted RBP4.1□□□□□ -1.75
VPS17YOR132W SVL3Q03088 825 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W CEF1Q03654 590 aaPredicted RBP4.1□□□□□ -1.75
VPS17YOR132W YHM2Q04013 314 aa4.1□□□□□ -1.75
VPS17YOR132W TAF3Q12297 353 aa4.1□□□□□ -1.75
VPS17YOR132W RPS21BQ3E754 87 aaKnown RBP4.1□□□□□ -1.75
VPS17YOR132W PDR5P33302 1511 aaKnown RBP4.09□□□□□ -1.75
VPS17YOR132W MRC1P25588 1096 aa4.09□□□□□ -1.76
VPS17YOR132W TDP1P38319 544 aa4.09□□□□□ -1.76
VPS17YOR132W BDH2P39713 417 aa4.09□□□□□ -1.76
VPS17YOR132W YIL077CP40508 320 aa4.09□□□□□ -1.76
VPS17YOR132W PXA1P41909 870 aa4.09□□□□□ -1.76
VPS17YOR132W NOP15P53927 220 aaPredicted RBP4.09□□□□□ -1.76
VPS17YOR132W PPN1Q04119 674 aa4.09□□□□□ -1.76
VPS17YOR132W YPS7Q06325 596 aa4.09□□□□□ -1.76
VPS17YOR132W YFT2Q06676 274 aa4.09□□□□□ -1.76
VPS17YOR132W HFI1Q12060 488 aa4.09□□□□□ -1.76
VPS17YOR132W NKP1Q12493 238 aa4.09□□□□□ -1.76
VPS17YOR132W SEC3P33332 1336 aaKnown RBP4.09□□□□□ -1.76
VPS17YOR132W RPS17AP02407 136 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms