RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W ECM32P32644 1121 aaKnown RBP3.21□□□□□ -1.9
PEP12YOR036W DID4P36108 232 aa3.21□□□□□ -1.9
PEP12YOR036W GPP2P40106 250 aaKnown RBP3.21□□□□□ -1.9
PEP12YOR036W PSA1P41940 361 aaKnown RBP3.21□□□□□ -1.9
PEP12YOR036W YGR153WP48238 217 aa3.21□□□□□ -1.9
PEP12YOR036W ECM9Q02202 377 aa3.21□□□□□ -1.9
PEP12YOR036W REC102Q02721 264 aa3.21□□□□□ -1.9
PEP12YOR036W SND1Q04007 877 aa3.21□□□□□ -1.9
PEP12YOR036W APM4Q99186 491 aa3.21□□□□□ -1.9
PEP12YOR036W ABF1P14164 731 aa3.2□□□□□ -1.9
PEP12YOR036W YKR018CP36114 725 aa3.2□□□□□ -1.9
PEP12YOR036W YKR051WP36142 418 aa3.2□□□□□ -1.9
PEP12YOR036W PEA2P40091 420 aa3.2□□□□□ -1.9
PEP12YOR036W GID8P40208 455 aa3.2□□□□□ -1.9
PEP12YOR036W PIP2P52960 996 aa3.2□□□□□ -1.9
PEP12YOR036W YNL034WP53963 612 aa3.2□□□□□ -1.9
PEP12YOR036W YNL018CP53976 612 aa3.2□□□□□ -1.9
PEP12YOR036W ARG7Q04728 441 aa3.2□□□□□ -1.9
PEP12YOR036W CHS5Q12114 671 aaKnown RBP3.2□□□□□ -1.9
PEP12YOR036W TPK2P06245 380 aa3.19□□□□□ -1.9
PEP12YOR036W SST2P11972 698 aaKnown RBP3.19□□□□□ -1.9
PEP12YOR036W PRP28P23394 588 aa3.19□□□□□ -1.9
PEP12YOR036W TFC4P33339 1025 aa3.19□□□□□ -1.9
PEP12YOR036W TDA3P38758 523 aa3.19□□□□□ -1.9
PEP12YOR036W HXT6P39003 570 aaKnown RBP3.19□□□□□ -1.9
PEP12YOR036W HXT7P39004 570 aa3.19□□□□□ -1.9
PEP12YOR036W YNL195CP40168 261 aa3.19□□□□□ -1.9
PEP12YOR036W PIG2P40187 538 aa3.19□□□□□ -1.9
PEP12YOR036W PMT6P42934 759 aa3.19□□□□□ -1.9
PEP12YOR036W YFL052WP43551 465 aa3.19□□□□□ -1.9
PEP12YOR036W IRC8P47046 822 aa3.19□□□□□ -1.9
PEP12YOR036W YJR039WP47107 1121 aa3.19□□□□□ -1.9
PEP12YOR036W NPY1P53164 384 aa3.19□□□□□ -1.9
PEP12YOR036W RPN7Q06103 429 aaKnown RBP3.19□□□□□ -1.9
PEP12YOR036W HFI1Q12060 488 aa3.19□□□□□ -1.9
PEP12YOR036W DCS2Q12123 353 aa3.19□□□□□ -1.9
PEP12YOR036W MDM20Q12387 796 aaKnown RBP3.19□□□□□ -1.9
PEP12YOR036W RMP1Q12530 201 aa3.19□□□□□ -1.9
PEP12YOR036W PWP2P25635 923 aaKnown RBP3.18□□□□□ -1.9
PEP12YOR036W OAF3P36023 863 aa3.18□□□□□ -1.9
PEP12YOR036W VPS24P36095 224 aaKnown RBP3.18□□□□□ -1.9
PEP12YOR036W RSC8P43609 557 aaKnown RBP3.18□□□□□ -1.9
PEP12YOR036W MPS3P47069 682 aa3.18□□□□□ -1.9
PEP12YOR036W PCL10P53124 433 aa3.18□□□□□ -1.9
PEP12YOR036W COX18P53239 316 aa3.18□□□□□ -1.9
PEP12YOR036W RKI1Q12189 258 aa3.18□□□□□ -1.9
PEP12YOR036W FRE7Q12333 620 aa3.18□□□□□ -1.9
PEP12YOR036W AI5_ALPHAQ9ZZX1 630 aa3.18□□□□□ -1.9
PEP12YOR036W AAD3P25612 363 aa3.17□□□□□ -1.9
PEP12YOR036W HEM12P32347 362 aaPredicted RBP3.17□□□□□ -1.9
PEP12YOR036W DAL3P32459 195 aa3.17□□□□□ -1.9
PEP12YOR036W SWE1P32944 819 aa3.17□□□□□ -1.9
PEP12YOR036W MNN4P36044 1178 aa3.17□□□□□ -1.9
PEP12YOR036W CTP1P38152 299 aa3.17□□□□□ -1.9
PEP12YOR036W RRP8P38961 392 aaKnown RBP3.17□□□□□ -1.9
PEP12YOR036W BEM4P39011 633 aa3.17□□□□□ -1.9
PEP12YOR036W EMP65P40085 556 aa3.17□□□□□ -1.9
PEP12YOR036W KHA1P40309 873 aa3.17□□□□□ -1.9
PEP12YOR036W RFX1P48743 811 aa3.17□□□□□ -1.9
PEP12YOR036W SNF12P53628 566 aa3.17□□□□□ -1.9
PEP12YOR036W ARP4P80428 489 aa3.17□□□□□ -1.9
PEP12YOR036W SKY1Q03656 742 aa3.17□□□□□ -1.9
PEP12YOR036W YDR179W-AQ03983 463 aa3.17□□□□□ -1.9
PEP12YOR036W RPS21BQ3E754 87 aaKnown RBP3.17□□□□□ -1.9
PEP12YOR036W MPD2Q99316 277 aa3.17□□□□□ -1.9
PEP12YOR036W PIF1P07271 859 aa3.16□□□□□ -1.9
PEP12YOR036W SWI6P09959 803 aa3.16□□□□□ -1.9
PEP12YOR036W RPS21AP0C0V8 87 aaKnown RBP3.16□□□□□ -1.9
PEP12YOR036W COX11P19516 300 aaKnown RBP3.16□□□□□ -1.9
PEP12YOR036W FEN2P25621 512 aaKnown RBP3.16□□□□□ -1.9
PEP12YOR036W MSS1P32559 526 aaPredicted RBP3.16□□□□□ -1.9
PEP12YOR036W MAL31P38156 614 aa3.16□□□□□ -1.9
PEP12YOR036W SSZ1P38788 538 aaKnown RBP3.16□□□□□ -1.9
PEP12YOR036W PTA1Q01329 785 aaPredicted RBP3.16□□□□□ -1.9
PEP12YOR036W MET14Q02196 202 aa3.16□□□□□ -1.9
PEP12YOR036W LEE1Q02799 301 aaKnown RBP3.16□□□□□ -1.9
PEP12YOR036W CEF1Q03654 590 aaPredicted RBP3.16□□□□□ -1.9
PEP12YOR036W YHM2Q04013 314 aa3.16□□□□□ -1.9
PEP12YOR036W PHM6Q05637 104 aa3.16□□□□□ -1.9
PEP12YOR036W KAR1P11927 433 aa3.15□□□□□ -1.91
PEP12YOR036W SER1P33330 395 aaKnown RBP3.15□□□□□ -1.91
PEP12YOR036W NIC96P34077 839 aa3.15□□□□□ -1.91
PEP12YOR036W APL3P38065 1025 aa3.15□□□□□ -1.91
PEP12YOR036W FUI1P38196 639 aa3.15□□□□□ -1.91
PEP12YOR036W IES5P40060 125 aa3.15□□□□□ -1.91
PEP12YOR036W SLD3P53135 668 aa3.15□□□□□ -1.91
PEP12YOR036W BRE5P53741 515 aaKnown RBP3.15□□□□□ -1.91
PEP12YOR036W GIS2P53849 153 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
PEP12YOR036W SUB1P54000 292 aaKnown RBP3.15□□□□□ -1.91
PEP12YOR036W UBX4P54730 416 aa3.15□□□□□ -1.91
PEP12YOR036W VMS1Q04311 632 aaKnown RBP3.15□□□□□ -1.91
PEP12YOR036W YSH1Q06224 779 aaPredicted RBP3.15□□□□□ -1.91
PEP12YOR036W PEX15Q08215 383 aa3.15□□□□□ -1.91
PEP12YOR036W DIA2Q08496 732 aaPredicted RBP3.15□□□□□ -1.91
PEP12YOR036W YPR027CQ12079 277 aa3.15□□□□□ -1.91
PEP12YOR036W NYV1Q12255 253 aa3.15□□□□□ -1.91
PEP12YOR036W LEU2P04173 364 aaPredicted RBP3.14□□□□□ -1.91
PEP12YOR036W GAL1P04385 528 aa3.14□□□□□ -1.91
PEP12YOR036W SEC65P29478 273 aa3.14□□□□□ -1.91
PEP12YOR036W FAT1P38225 669 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms