RNA–Protein interactions for RNA: YKR004C

ECM9, Transcript of Non-essential protein of unknown function, yeast

Gene ECM9, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM9	YKR004C	IME1	P21190	360 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	THI4	P32318	326 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	PIH1	P38768	344 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	ATG36	P46983	293 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	YMR210W	Q03649	449 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	YLR407W	Q06070	228 aa		4.93	□□□□□ -1.62
ECM9	YKR004C	RPL7B	Q12213	244 aa	Known RBP	4.93	□□□□□ -1.62
ECM9	YKR004C	HEM1	P09950	548 aa	Predicted RBP	4.92	□□□□□ -1.62
ECM9	YKR004C	RGT1	P32862	1170 aa		4.92	□□□□□ -1.62
ECM9	YKR004C	TMN3	P40071	706 aa		4.92	□□□□□ -1.62
ECM9	YKR004C	YIP4	P53093	235 aa		4.92	□□□□□ -1.62
ECM9	YKR004C	CPA2	P03965	1118 aa	Known RBP	4.91	□□□□□ -1.62
ECM9	YKR004C	BUD8	P41698	603 aa		4.91	□□□□□ -1.62
ECM9	YKR004C	NMD5	P46970	1048 aa		4.91	□□□□□ -1.62
ECM9	YKR004C	IRC8	P47046	822 aa		4.91	□□□□□ -1.62
ECM9	YKR004C	PXA1	P41909	870 aa		4.9	□□□□□ -1.63
ECM9	YKR004C	SPO1	P53541	631 aa		4.9	□□□□□ -1.63
ECM9	YKR004C	ERG13	P54839	491 aa	Known RBP	4.9	□□□□□ -1.63
ECM9	YKR004C	YPS7	Q06325	596 aa		4.9	□□□□□ -1.63
ECM9	YKR004C	AQY1	P0CD91	305 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	MRPL9	P31334	269 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	PPE1	P38796	400 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	MFM1	Q02783	413 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	FDC1	Q03034	503 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	NTG2	Q08214	380 aa		4.89	□□□□□ -1.63
ECM9	YKR004C	EUG1	P32474	517 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	RPC34	P32910	317 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	MRPL7	P36519	292 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	MET13	P53128	600 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	COQ6	P53318	479 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	YNL018C	P53976	612 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	EFR3	Q03653	782 aa	Known RBP	4.88	□□□□□ -1.63
ECM9	YKR004C	YDL073W	Q07454	984 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	GUD1	Q07729	489 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	YLR001C	Q07895	862 aa		4.88	□□□□□ -1.63
ECM9	YKR004C	PRS5	Q12265	496 aa	Known RBP	4.88	□□□□□ -1.63
ECM9	YKR004C	TSR4	P25040	408 aa		4.87	□□□□□ -1.63
ECM9	YKR004C	CNE1	P27825	502 aa		4.87	□□□□□ -1.63
ECM9	YKR004C	SNO3	P43544	222 aa		4.87	□□□□□ -1.63
ECM9	YKR004C	BFA1	P47113	574 aa		4.87	□□□□□ -1.63
ECM9	YKR004C	CEF1	Q03654	590 aa	Predicted RBP	4.87	□□□□□ -1.63
ECM9	YKR004C	PPN1	Q04119	674 aa		4.87	□□□□□ -1.63
ECM9	YKR004C	APD1	P38281	316 aa		4.86	□□□□□ -1.63
ECM9	YKR004C	YJL043W	P47053	257 aa		4.86	□□□□□ -1.63
ECM9	YKR004C	TIM50	Q02776	476 aa		4.86	□□□□□ -1.63
ECM9	YKR004C	RSC9	Q03124	581 aa		4.86	□□□□□ -1.63
ECM9	YKR004C	STP4	Q07351	490 aa		4.86	□□□□□ -1.63
ECM9	YKR004C	YMR084W	A2P2R3	262 aa		4.85	□□□□□ -1.63
ECM9	YKR004C	WHI2	P12611	486 aa		4.85	□□□□□ -1.63
ECM9	YKR004C	OCA5	P38738	679 aa		4.85	□□□□□ -1.63
ECM9	YKR004C	YGR054W	P53235	642 aa	Known RBP	4.85	□□□□□ -1.63
ECM9	YKR004C	SCW4	P53334	386 aa	Known RBP	4.85	□□□□□ -1.63
ECM9	YKR004C	BUD17	P53727	317 aa		4.85	□□□□□ -1.63
ECM9	YKR004C	YPL216W	Q08964	1102 aa		4.85	□□□□□ -1.63
ECM9	YKR004C	PRE4	P30657	266 aa		4.84	□□□□□ -1.63
ECM9	YKR004C	CRG1	P38892	291 aa	RIP-Chip data	4.84	□□□□□ -1.63	not detected
ECM9	YKR004C	BST1	P43571	1029 aa		4.84	□□□□□ -1.63
ECM9	YKR004C	POB3	Q04636	552 aa	Known RBP	4.84	□□□□□ -1.63
ECM9	YKR004C	SEC3	P33332	1336 aa	Known RBP	4.83	□□□□□ -1.64
ECM9	YKR004C	SWI6	P09959	803 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
ECM9	YKR004C	SPC97	P38863	823 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	FTR1	P40088	404 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	PCI8	P40512	444 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	MNT3	P40549	630 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	HLR1	Q04429	423 aa		4.83	□□□□□ -1.64
ECM9	YKR004C	RPS17A	P02407	136 aa	Known RBP	4.82	□□□□□ -1.64
ECM9	YKR004C	RPS17B	P14127	136 aa	Known RBP	4.82	□□□□□ -1.64
ECM9	YKR004C	ASK1	P35734	292 aa		4.82	□□□□□ -1.64
ECM9	YKR004C	EXO1	P39875	702 aa		4.82	□□□□□ -1.64
ECM9	YKR004C	RPS15	Q01855	142 aa	Known RBP	4.82	□□□□□ -1.64
ECM9	YKR004C	TDA3	P38758	523 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	JHD1	P40034	492 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	YFL015C	P43578	164 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	RET2	P43621	546 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	TAF4	P50105	388 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	NOP15	P53927	220 aa	Predicted RBP	4.81	□□□□□ -1.64
ECM9	YKR004C	BSP1	Q06604	576 aa		4.81	□□□□□ -1.64
ECM9	YKR004C	URE2	P23202	354 aa	Known RBP	4.8	□□□□□ -1.64
ECM9	YKR004C	GSY2	P27472	705 aa		4.8	□□□□□ -1.64
ECM9	YKR004C	DHR2	P36009	735 aa	Predicted RBP	4.8	□□□□□ -1.64
ECM9	YKR004C	CDS1	P38221	457 aa		4.8	□□□□□ -1.64
ECM9	YKR004C	IDP3	P53982	420 aa	Known RBP	4.8	□□□□□ -1.64
ECM9	YKR004C	TFB2	Q02939	513 aa		4.8	□□□□□ -1.64
ECM9	YKR004C	HOP1	P20050	605 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	RNR3	P21672	869 aa	Known RBP	4.79	□□□□□ -1.64
ECM9	YKR004C	PXL1	P36166	706 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	YNL193W	P53870	558 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	NSE5	Q03718	556 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	GFD1	Q04839	188 aa	Known RBP	4.79	□□□□□ -1.64
ECM9	YKR004C	TGS1	Q12052	315 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	CRC1	Q12289	327 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	RDL1	Q12305	139 aa	Known RBP	4.79	□□□□□ -1.64
ECM9	YKR004C	YLR111W	Q12528	110 aa		4.79	□□□□□ -1.64
ECM9	YKR004C	LOT5	P34234	306 aa		4.78	□□□□□ -1.64
ECM9	YKR004C	DUN1	P39009	513 aa		4.78	□□□□□ -1.64
ECM9	YKR004C	MGS1	P40151	587 aa		4.78	□□□□□ -1.64
ECM9	YKR004C	IES1	P43579	692 aa		4.78	□□□□□ -1.64
ECM9	YKR004C	ORC1	P54784	914 aa	Predicted RBP	4.78	□□□□□ -1.64
ECM9	YKR004C	YAP1	P19880	650 aa	Known RBP	4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 1052.5 ms