RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	MFT1	P33441	392 aa	Known RBP	13.43	□□□□□ -0.26
HOM6	YJR139C	ALF1	P53904	254 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	YNL144C	P53907	740 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	FAP1	P53971	965 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	CTR9	P89105	1077 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	SXM1	Q04175	944 aa	Known RBP	13.43	□□□□□ -0.26
HOM6	YJR139C	ERV41	Q04651	352 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	LCB4	Q12246	624 aa		13.43	□□□□□ -0.26
HOM6	YJR139C	PDH1	Q12428	516 aa	Known RBP	13.43	□□□□□ -0.26
HOM6	YJR139C	CCP1	P00431	361 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	SEC23	P15303	768 aa	Known RBP	13.42	□□□□□ -0.26
HOM6	YJR139C	BLI1	P35727	113 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	ECM13	P38195	257 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	HIS2	P38635	335 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	MED6	P38782	295 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	NMD3	P38861	518 aa	Known RBP	13.42	□□□□□ -0.26
HOM6	YJR139C	YGR283C	P53336	341 aa	Predicted RBP	13.42	□□□□□ -0.26
HOM6	YJR139C	SFB2	P53953	876 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	PMT7	Q06644	662 aa		13.42	□□□□□ -0.26
HOM6	YJR139C	LYS9	P38999	446 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	SEC9	P40357	651 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	ASG1	P40467	964 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	YIL054W	P40524	105 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	SAP185	P40856	1058 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	UFE1	P41834	346 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	TUB4	P53378	473 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	PIR3	Q03180	325 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	AIM32	Q04689	311 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	YOR387C	Q08910	206 aa		13.41	□□□□□ -0.26
HOM6	YJR139C	ADE3	P07245	946 aa	Known RBP	13.4	□□□□□ -0.26
HOM6	YJR139C	DBF4	P32325	704 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	HXT1	P32465	570 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	TCD1	P38756	429 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	TMA108	P40462	946 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	EFM4	P40516	257 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	COQ6	P53318	479 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	KTR6	P54070	446 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	RKM2	Q03942	479 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	YDR278C	Q05612	105 aa		13.4	□□□□□ -0.26
HOM6	YJR139C	ENO2	P00925	437 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	RPS14A	P06367	137 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	HIS5	P07172	385 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	TRX1	P22217	103 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	YIH1	P25637	258 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	PSE1	P32337	1089 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	STO1	P34160	861 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	ATG12	P38316	186 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	SWC5	P38326	303 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	RRT2	P38332	387 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	RPS14B	P39516	138 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	SPC72	P39723	622 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	BRO1	P48582	844 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	INA17	Q02888	182 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	DIG1	Q03063	452 aa	Known RBP	13.39	□□□□□ -0.27
HOM6	YJR139C	SVS1	Q12254	260 aa		13.39	□□□□□ -0.27
HOM6	YJR139C	CAP1	P28495	268 aa	Known RBP	13.38	□□□□□ -0.27
HOM6	YJR139C	KHA1	P40309	873 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	KAP114	P53067	1004 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	BIO5	P53744	561 aa	Known RBP	13.38	□□□□□ -0.27
HOM6	YJR139C	BET4	Q00618	327 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	TOF2	Q02208	771 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	ATG16	Q03818	150 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	SEG1	Q04279	960 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	IVY1	Q04934	453 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	AAD4	Q07747	329 aa		13.38	□□□□□ -0.27
HOM6	YJR139C	MCX1	P38323	520 aa	Predicted RBP	13.37	□□□□□ -0.27
HOM6	YJR139C	CHS6	P40955	746 aa		13.37	□□□□□ -0.27
HOM6	YJR139C	CIR2	Q08822	631 aa		13.37	□□□□□ -0.27
HOM6	YJR139C	THI21	Q08975	551 aa		13.37	□□□□□ -0.27
HOM6	YJR139C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	13.37	□□□□□ -0.27	not detected
HOM6	YJR139C	YPK1	P12688	680 aa	Known RBP	13.36	□□□□□ -0.27
HOM6	YJR139C	GFA1	P14742	717 aa	Known RBP	13.36	□□□□□ -0.27
HOM6	YJR139C	YJR079W	P47126	109 aa		13.36	□□□□□ -0.27
HOM6	YJR139C	PEX31	P53203	462 aa		13.36	□□□□□ -0.27
HOM6	YJR139C	COP1	P53622	1201 aa	Known RBP	13.36	□□□□□ -0.27
HOM6	YJR139C	NOG2	P53742	486 aa	Known RBP	13.36	□□□□□ -0.27
HOM6	YJR139C	YNL040W	P53960	456 aa	Predicted RBP	13.36	□□□□□ -0.27
HOM6	YJR139C	CDC55	Q00362	526 aa		13.36	□□□□□ -0.27
HOM6	YJR139C	SGE1	P33335	543 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	KTR4	P38131	464 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	URA8	P38627	578 aa	Predicted RBP	13.35	□□□□□ -0.27
HOM6	YJR139C	GYP8	P43570	497 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	ART5	P53244	586 aa	Known RBP	13.35	□□□□□ -0.27
HOM6	YJR139C	BTN2	P53286	410 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	TRM112	P53738	135 aa	Predicted RBP	13.35	□□□□□ -0.27
HOM6	YJR139C	YNL108C	P53929	270 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	UFO1	Q04511	668 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	ECM38	Q05902	660 aa	Predicted RBP	13.35	□□□□□ -0.27
HOM6	YJR139C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	13.35	□□□□□ -0.27	not detected
HOM6	YJR139C	NSE1	Q07913	336 aa		13.35	□□□□□ -0.27
HOM6	YJR139C	MET16	P18408	261 aa	Predicted RBP	13.34	□□□□□ -0.27
HOM6	YJR139C	SWE1	P32944	819 aa		13.34	□□□□□ -0.27
HOM6	YJR139C	PMC1	P38929	1173 aa	Predicted RBP	13.34	□□□□□ -0.27
HOM6	YJR139C	CNN1	P43618	361 aa		13.34	□□□□□ -0.27
HOM6	YJR139C	RTT101	P47050	842 aa		13.34	□□□□□ -0.27
HOM6	YJR139C	ARA2	Q04212	335 aa		13.34	□□□□□ -0.27
HOM6	YJR139C	SRB4	P32569	687 aa		13.33	□□□□□ -0.28
HOM6	YJR139C	PTC3	P34221	468 aa	Known RBP	13.33	□□□□□ -0.28
HOM6	YJR139C	ARP1	P38696	384 aa		13.33	□□□□□ -0.28
HOM6	YJR139C	CAJ1	P39101	391 aa		13.33	□□□□□ -0.28

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms