RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene SDS3, Length 984 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS3	YIL084C	YHM2	Q04013	314 aa		4.99	□□□□□ -1.61
SDS3	YIL084C	BEM4	P39011	633 aa		4.98	□□□□□ -1.61
SDS3	YIL084C	NUG1	P40010	520 aa	Known RBP	4.98	□□□□□ -1.61
SDS3	YIL084C	ISA1	Q07821	250 aa	Predicted RBP	4.98	□□□□□ -1.61
SDS3	YIL084C	RMP1	Q12530	201 aa		4.98	□□□□□ -1.61
SDS3	YIL084C	AEP2	P22136	580 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	SEC65	P29478	273 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	OAF3	P36023	863 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	YBR071W	P38243	211 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	SUL1	P38359	859 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	SGO1	Q08490	590 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	DIA2	Q08496	732 aa	Predicted RBP	4.97	□□□□□ -1.61
SDS3	YIL084C	FRE5	Q08908	694 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	HFI1	Q12060	488 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	SPT7	P35177	1332 aa		4.97	□□□□□ -1.61
SDS3	YIL084C	ALG7	P07286	448 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	SWI6	P09959	803 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	RNR1	P21524	888 aa	Known RBP	4.96	□□□□□ -1.62
SDS3	YIL084C	YBR053C	P38235	358 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	HXT6	P39003	570 aa	Known RBP	4.96	□□□□□ -1.62
SDS3	YIL084C	HXT7	P39004	570 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	FOL1	P53848	824 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	HMO1	Q03973	246 aa	Known RBP	4.96	□□□□□ -1.62
SDS3	YIL084C	YLR407W	Q06070	228 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	YLR040C	Q07988	224 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	VHS3	Q08438	674 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	BUG1	Q12191	341 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	RPS21B	Q3E754	87 aa	Known RBP	4.96	□□□□□ -1.62
SDS3	YIL084C	APM4	Q99186	491 aa		4.96	□□□□□ -1.62
SDS3	YIL084C	FAS2	P19097	1887 aa	Known RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	PPR1	P07272	904 aa	Predicted RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	ERG20	P08524	352 aa	Known RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	IMG2	P25642	146 aa	Predicted RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	ESL2	P36168	1195 aa		4.95	□□□□□ -1.62
SDS3	YIL084C	CCT3	P39077	534 aa	Known RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	BAP3	P41815	604 aa		4.95	□□□□□ -1.62
SDS3	YIL084C	YJL163C	P46996	555 aa		4.95	□□□□□ -1.62
SDS3	YIL084C	YJR120W	P47157	116 aa		4.95	□□□□□ -1.62
SDS3	YIL084C	ADE16	P54113	591 aa	Known RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	RIX7	Q07844	837 aa	Known RBP	4.95	□□□□□ -1.62
SDS3	YIL084C	CTT1	P06115	562 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	PET127	P32606	800 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	YKU70	P32807	602 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	HIS7	P33734	552 aa	Known RBP	4.94	□□□□□ -1.62
SDS3	YIL084C	REV7	P38927	245 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	GPP2	P40106	250 aa	Known RBP	4.94	□□□□□ -1.62
SDS3	YIL084C	HOS4	P40480	1083 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	RNR4	P49723	345 aa	Known RBP	4.94	□□□□□ -1.62
SDS3	YIL084C	MTL1	P53214	551 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	NOP15	P53927	220 aa	Predicted RBP	4.94	□□□□□ -1.62
SDS3	YIL084C	SKY1	Q03656	742 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	ADY4	Q05955	493 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	YOL073C	Q08232	322 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	YPR027C	Q12079	277 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	TRM13	Q12383	476 aa		4.94	□□□□□ -1.62
SDS3	YIL084C	HRP1	Q99383	534 aa	Known RBP	4.94	□□□□□ -1.62
SDS3	YIL084C	TOP1	P04786	769 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	RPS21A	P0C0V8	87 aa	Known RBP	4.93	□□□□□ -1.62
SDS3	YIL084C	FRS1	P15624	595 aa	Known RBP	4.93	□□□□□ -1.62
SDS3	YIL084C	SEC15	P22224	910 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	BCD1	P38772	366 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	DUN1	P39009	513 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	NUP60	P39705	539 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	DAS1	P47005	663 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	NIT2	P47016	307 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	PEX14	P53112	341 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	COG6	P53959	839 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	VBA4	Q04602	768 aa	Known RBP	4.93	□□□□□ -1.62
SDS3	YIL084C	YLR419W	Q06698	1435 aa	Known RBP	4.93	□□□□□ -1.62
SDS3	YIL084C	ECM3	Q99252	613 aa		4.93	□□□□□ -1.62
SDS3	YIL084C	MHP1	P43638	1398 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	RPS17A	P02407	136 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	LEU2	P04173	364 aa	Predicted RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	RPS17B	P14127	136 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	PEX1	P24004	1043 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	ERG6	P25087	383 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	MVD1	P32377	396 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	MOH1	P38191	138 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	FMO1	P38866	432 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	LYS9	P38999	446 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	EMP65	P40085	556 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	YNL195C	P40168	261 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	RSC8	P43609	557 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	NOP9	P47077	666 aa	Known RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	UBC11	P52492	156 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	SPC105	P53148	917 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	IRC13	Q08630	104 aa		4.92	□□□□□ -1.62
SDS3	YIL084C	CLF1	Q12309	687 aa	Predicted RBP	4.92	□□□□□ -1.62
SDS3	YIL084C	KAR1	P11927	433 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	GLN4	P13188	809 aa	Known RBP	4.91	□□□□□ -1.62
SDS3	YIL084C	SPE2	P21182	396 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	PRP22	P24384	1145 aa	Known RBP	4.91	□□□□□ -1.62
SDS3	YIL084C	KIN82	P25341	720 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	DAL3	P32459	195 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	BIT2	P38346	545 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	FMP52	P40008	231 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	GET2	P40056	285 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	ENP2	P48234	707 aa	Known RBP	4.91	□□□□□ -1.62
SDS3	YIL084C	SLD3	P53135	668 aa		4.91	□□□□□ -1.62
SDS3	YIL084C	PPN1	Q04119	674 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms