RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTM1	YHR109W	MRPS35	P53292	345 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	REC102	Q02721	264 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	PCD1	Q12524	340 aa		4.19	□□□□□ -1.74
CTM1	YHR109W	TRP3	P00937	484 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	LEU2	P04173	364 aa	Predicted RBP	4.18	□□□□□ -1.74
CTM1	YHR109W	EMC1	P25574	760 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	CWH43	P25618	953 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	YPT7	P32939	208 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	UBS1	P38290	277 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	RPP1	P38786	293 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	PRM2	P40534	656 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	NOP9	P47077	666 aa	Known RBP	4.18	□□□□□ -1.74
CTM1	YHR109W	PEF1	P53238	335 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	NSE5	Q03718	556 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	SNO4	Q04902	237 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	TFC6	Q06339	672 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	PEX19	Q07418	342 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	AAD4	Q07747	329 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	SDH5	Q08230	162 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	HSP33	Q08914	237 aa	Known RBP	4.18	□□□□□ -1.74
CTM1	YHR109W	HSP32	Q08992	237 aa		4.18	□□□□□ -1.74
CTM1	YHR109W	RPS9B	P05755	195 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	HIS5	P07172	385 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	ERG20	P08524	352 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	HMG2	P12684	1045 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	PAH1	P32567	862 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	RPT3	P33298	428 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	YBR259W	P38338	688 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	YER010C	P40011	234 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	LYS14	P40971	790 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	TAH11	P47112	604 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	SRB7	P47822	140 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	SAP4	P53036	818 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	RGC1	Q06108	1083 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	CSR1	Q06705	408 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	BRE4	Q07660	1125 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	ICL2	Q12031	575 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	YDL177C	Q12257	170 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	HRP1	Q99383	534 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	PCK1	P10963	549 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	BET2	P20133	325 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	APT2	P36973	181 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	EHT1	P38295	451 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	SIC1	P38634	284 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	STB5	P38699	743 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	CRG1	P38892	291 aa	RIP-Chip data	4.17	□□□□□ -1.74	not detected
CTM1	YHR109W	UME6	P39001	836 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	GET2	P40056	285 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	CTF18	P49956	741 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	YAP1802	P53309	568 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	TEX1	P53851	422 aa	Known RBP	4.17	□□□□□ -1.74
CTM1	YHR109W	NRG1	Q03125	231 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	MCM21	Q06675	368 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	TGL5	Q12043	749 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	YPR053C	Q6Q5F3	151 aa		4.17	□□□□□ -1.74
CTM1	YHR109W	MET8	P15807	274 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	TUP1	P16649	713 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
CTM1	YHR109W	FRD1	P32614	470 aa	Known RBP	4.16	□□□□□ -1.74
CTM1	YHR109W	YLF2	P38746	405 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	NOP16	P40007	231 aa	Known RBP	4.16	□□□□□ -1.74
CTM1	YHR109W	FAF1	P40546	346 aa	Predicted RBP	4.16	□□□□□ -1.74
CTM1	YHR109W	CHA4	P43634	648 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	YDL183C	P48569	320 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
CTM1	YHR109W	TIM10	P87108	93 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	HMO1	Q03973	246 aa	Known RBP	4.16	□□□□□ -1.74
CTM1	YHR109W	ARA2	Q04212	335 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	TRI1	Q05024	226 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	YCG1	Q06680	1035 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	YOR352W	Q08816	343 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	HMI1	Q12039	706 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	NPC2	Q12408	173 aa		4.16	□□□□□ -1.74
CTM1	YHR109W	CDC16	P09798	840 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	ARP2	P32381	391 aa	Known RBP	4.15	□□□□□ -1.74
CTM1	YHR109W	SFB3	P38810	929 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	FTR1	P40088	404 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	CAB2	P40506	365 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	GSM1	P42950	618 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	VTC2	P43585	828 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	MTL1	P53214	551 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	TIM50	Q02776	476 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	TDA9	Q04545	1251 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	COX17	Q12287	69 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	SNU66	Q12420	587 aa	Predicted RBP	4.15	□□□□□ -1.74
CTM1	YHR109W	POM34	Q12445	299 aa		4.15	□□□□□ -1.74
CTM1	YHR109W	CDC6	P09119	513 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	PRP22	P24384	1145 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	CAD1	P24813	409 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	RPS7A	P26786	190 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	TEF4	P36008	412 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	CCT3	P39077	534 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	YAP6	Q03935	383 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	PPN1	Q04119	674 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	GAD1	Q04792	585 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	IMH1	Q06704	911 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	FUM1	P08417	488 aa	Known RBP	4.14	□□□□□ -1.75
CTM1	YHR109W	SEC15	P22224	910 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	RAD16	P31244	790 aa		4.14	□□□□□ -1.75
CTM1	YHR109W	MAC1	P35192	417 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms