RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W SEG2P34250 1132 aa5.46□□□□□ -1.54
DEG1YFL001W YNL195CP40168 261 aa5.46□□□□□ -1.54
DEG1YFL001W TMA108P40462 946 aa5.46□□□□□ -1.54
DEG1YFL001W BIT61P47041 543 aa5.46□□□□□ -1.54
DEG1YFL001W BNA1P47096 177 aa5.46□□□□□ -1.54
DEG1YFL001W PEX19Q07418 342 aa5.46□□□□□ -1.54
DEG1YFL001W NOP12Q08208 459 aaKnown RBP5.46□□□□□ -1.54
DEG1YFL001W YOR352WQ08816 343 aa5.46□□□□□ -1.54
DEG1YFL001W NPC2Q12408 173 aa5.46□□□□□ -1.54
DEG1YFL001W MIS1P09440 975 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W RNR1P21524 888 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W UBC1P21734 215 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W PRP22P24384 1145 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W CCT3P39077 534 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W MEF2P39677 819 aa5.45□□□□□ -1.54
DEG1YFL001W KAP123P40069 1113 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W HOS4P40480 1083 aa5.45□□□□□ -1.54
DEG1YFL001W PRM2P40534 656 aa5.45□□□□□ -1.54
DEG1YFL001W AIM21P40563 679 aa5.45□□□□□ -1.54
DEG1YFL001W NOP9P47077 666 aaKnown RBP5.45□□□□□ -1.54
DEG1YFL001W COX18P53239 316 aa5.45□□□□□ -1.54
DEG1YFL001W NRG1Q03125 231 aa5.45□□□□□ -1.54
DEG1YFL001W TFC6Q06339 672 aa5.45□□□□□ -1.54
DEG1YFL001W IWR1Q07532 353 aaPredicted RBP5.45□□□□□ -1.54
DEG1YFL001W TRM11Q12463 433 aa5.45□□□□□ -1.54
DEG1YFL001W URA3P03962 267 aa5.44□□□□□ -1.54
DEG1YFL001W NUC1P08466 329 aa5.44□□□□□ -1.54
DEG1YFL001W HMG2P12684 1045 aa5.44□□□□□ -1.54
DEG1YFL001W RMA1P36001 430 aaKnown RBP5.44□□□□□ -1.54
DEG1YFL001W RPP1P38786 293 aa5.44□□□□□ -1.54
DEG1YFL001W SPO1P53541 631 aa5.44□□□□□ -1.54
DEG1YFL001W TEX1P53851 422 aaKnown RBP5.44□□□□□ -1.54
DEG1YFL001W SQS1P53866 767 aaKnown RBP5.44□□□□□ -1.54
DEG1YFL001W RXT3Q07458 294 aa5.44□□□□□ -1.54
DEG1YFL001W AAD4Q07747 329 aa5.44□□□□□ -1.54
DEG1YFL001W TGL5Q12043 749 aa5.44□□□□□ -1.54
DEG1YFL001W HOS1Q12214 470 aa5.44□□□□□ -1.54
DEG1YFL001W MED1Q12321 566 aa5.44□□□□□ -1.54
DEG1YFL001W INH1P01097 85 aa5.43□□□□□ -1.54
DEG1YFL001W POL3P15436 1097 aa5.43□□□□□ -1.54
DEG1YFL001W CLB4P24871 460 aa5.43□□□□□ -1.54
DEG1YFL001W ERG6P25087 383 aaKnown RBP5.43□□□□□ -1.54
DEG1YFL001W FRD1P32614 470 aaKnown RBP5.43□□□□□ -1.54
DEG1YFL001W SLC1P33333 303 aa5.43□□□□□ -1.54
DEG1YFL001W CTF13P35203 478 aa5.43□□□□□ -1.54
DEG1YFL001W JNM1P36224 373 aa5.43□□□□□ -1.54
DEG1YFL001W TAH11P47112 604 aa5.43□□□□□ -1.54
DEG1YFL001W ECL1P48235 211 aa5.43□□□□□ -1.54
DEG1YFL001W GCN5Q03330 439 aa5.43□□□□□ -1.54
DEG1YFL001W YDR132CQ03900 495 aa5.43□□□□□ -1.54
DEG1YFL001W GAD1Q04792 585 aa5.43□□□□□ -1.54
DEG1YFL001W TSR2Q06672 205 aaKnown RBP5.43□□□□□ -1.54
DEG1YFL001W CRD1Q07560 283 aa5.43□□□□□ -1.54
DEG1YFL001W POM34Q12445 299 aa5.43□□□□□ -1.54
DEG1YFL001W ATG11Q12527 1178 aa5.43□□□□□ -1.54
DEG1YFL001W ECM3Q99252 613 aa5.43□□□□□ -1.54
DEG1YFL001W HRP1Q99383 534 aaKnown RBP5.43□□□□□ -1.54
DEG1YFL001W SNF1P06782 633 aaKnown RBP5.42□□□□□ -1.54
DEG1YFL001W ARG1P22768 420 aa5.42□□□□□ -1.54
DEG1YFL001W KIN82P25341 720 aa5.42□□□□□ -1.54
DEG1YFL001W RPT3P33298 428 aaKnown RBP5.42□□□□□ -1.54
DEG1YFL001W CDS1P38221 457 aa5.42□□□□□ -1.54
DEG1YFL001W YBR138CP38277 524 aa5.42□□□□□ -1.54
DEG1YFL001W NDE1P40215 560 aa5.42□□□□□ -1.54
DEG1YFL001W SRB7P47822 140 aa5.42□□□□□ -1.54
DEG1YFL001W CTF18P49956 741 aa5.42□□□□□ -1.54
DEG1YFL001W MRPS35P53292 345 aa5.42□□□□□ -1.54
DEG1YFL001W YAP6Q03935 383 aa5.42□□□□□ -1.54
DEG1YFL001W VID22Q05934 901 aa5.42□□□□□ -1.54
DEG1YFL001W ACK1Q07622 623 aaPredicted RBP5.42□□□□□ -1.54
DEG1YFL001W HIR3P47171 1648 aa5.41□□□□□ -1.54
DEG1YFL001W CDC31P06704 161 aaKnown RBP5.41□□□□□ -1.54
DEG1YFL001W CDC20P26309 610 aa5.41□□□□□ -1.54
DEG1YFL001W NPR3P38742 1146 aa5.41□□□□□ -1.54
DEG1YFL001W AXL2P38928 823 aa5.41□□□□□ -1.54
DEG1YFL001W GET2P40056 285 aa5.41□□□□□ -1.54
DEG1YFL001W PSF2P40359 213 aa5.41□□□□□ -1.54
DEG1YFL001W ESL1P40456 1118 aa5.41□□□□□ -1.54
DEG1YFL001W FAF1P40546 346 aaPredicted RBP5.41□□□□□ -1.54
DEG1YFL001W YDL183CP48569 320 aa5.41□□□□□ -1.54
DEG1YFL001W TUF1P02992 437 aaKnown RBP5.4□□□□□ -1.55
DEG1YFL001W LEU2P04173 364 aaPredicted RBP5.4□□□□□ -1.55
DEG1YFL001W RPS9BP05755 195 aaKnown RBP5.4□□□□□ -1.55
DEG1YFL001W PEX1P24004 1043 aa5.4□□□□□ -1.55
DEG1YFL001W SWI4P25302 1093 aaKnown RBP5.4□□□□□ -1.55
DEG1YFL001W KAR4P25583 335 aa5.4□□□□□ -1.55
DEG1YFL001W IFA38P38286 347 aa5.4□□□□□ -1.55
DEG1YFL001W GSM1P42950 618 aa5.4□□□□□ -1.55
DEG1YFL001W IMA1P53051 589 aa5.4□□□□□ -1.55
DEG1YFL001W RRT6P53117 311 aaPredicted RBP5.4□□□□□ -1.55
DEG1YFL001W MDR1P53258 950 aa5.4□□□□□ -1.55
DEG1YFL001W MRPL22P53881 309 aa5.4□□□□□ -1.55
DEG1YFL001W ACS1Q01574 713 aa5.4□□□□□ -1.55
DEG1YFL001W YCG1Q06680 1035 aa5.4□□□□□ -1.55
DEG1YFL001W CSR1Q06705 408 aaKnown RBP5.4□□□□□ -1.55
DEG1YFL001W DIA2Q08496 732 aaPredicted RBP5.4□□□□□ -1.55
DEG1YFL001W MRPL36P36531 177 aa5.39□□□□□ -1.55
DEG1YFL001W CRG1P38892 291 aaRIP-Chip data5.39□□□□□ -1.55not detected
DEG1YFL001W LYS9P38999 446 aa5.39□□□□□ -1.55
DEG1YFL001W PLB1P39105 664 aa5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms