RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W CLF1Q12309 687 aaPredicted RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-HO13535 1793 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-DR5P0C2I2 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-DR6P0C2I3 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-LR2P0C2I5 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-LR3P0C2I6 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-PR1P0C2I9 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-PR2P0C2J0 1756 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-PR3P0C2J1 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-JR1P47098 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-ML2Q03434 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-ER1Q03612 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-ML1Q04711 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TY1B-GR2Q12269 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-OLQ12273 1755 aa5.42□□□□□ -1.54
RRP17YDR412W TY1B-PLQ12414 1755 aaKnown RBP5.42□□□□□ -1.54
RRP17YDR412W TDA3P38758 523 aa5.41□□□□□ -1.54
RRP17YDR412W CKB2P38930 258 aa5.41□□□□□ -1.54
RRP17YDR412W RET2P43621 546 aa5.41□□□□□ -1.54
RRP17YDR412W YJR142WP47173 342 aa5.41□□□□□ -1.54
RRP17YDR412W IZH3Q07959 543 aa5.41□□□□□ -1.54
RRP17YDR412W TY1B-DR3Q99231 1755 aa5.41□□□□□ -1.54
RRP17YDR412W PRP19P32523 503 aaKnown RBP5.4□□□□□ -1.54
RRP17YDR412W FAT1P38225 669 aa5.4□□□□□ -1.54
RRP17YDR412W GPG1P53130 126 aa5.4□□□□□ -1.54
RRP17YDR412W SPC98P53540 846 aa5.4□□□□□ -1.54
RRP17YDR412W ECM9Q02202 377 aa5.4□□□□□ -1.54
RRP17YDR412W YMR210WQ03649 449 aa5.4□□□□□ -1.54
RRP17YDR412W MTQ2Q03920 221 aaPredicted RBP5.4□□□□□ -1.54
RRP17YDR412W THI73Q07904 523 aa5.4□□□□□ -1.54
RRP17YDR412W VPS15P22219 1454 aa5.39□□□□□ -1.55
RRP17YDR412W RPS21AP0C0V8 87 aaKnown RBP5.39□□□□□ -1.55
RRP17YDR412W SFP1P32432 683 aa5.39□□□□□ -1.55
RRP17YDR412W ELF1P36053 145 aa5.39□□□□□ -1.55
RRP17YDR412W TYS1P36421 394 aaKnown RBP5.39□□□□□ -1.55
RRP17YDR412W ASN1P49089 572 aaKnown RBP5.39□□□□□ -1.55
RRP17YDR412W DIP5P53388 608 aa5.39□□□□□ -1.55
RRP17YDR412W NOP15P53927 220 aaPredicted RBP5.39□□□□□ -1.55
RRP17YDR412W TIM50Q02776 476 aa5.39□□□□□ -1.55
RRP17YDR412W OSW1Q08692 278 aa5.39□□□□□ -1.55
RRP17YDR412W RPS17AP02407 136 aaKnown RBP5.38□□□□□ -1.55
RRP17YDR412W RPS9BP05755 195 aaKnown RBP5.38□□□□□ -1.55
RRP17YDR412W RPS17BP14127 136 aaKnown RBP5.38□□□□□ -1.55
RRP17YDR412W YMC1P32331 307 aa5.38□□□□□ -1.55
RRP17YDR412W YKR075CP36155 307 aa5.38□□□□□ -1.55
RRP17YDR412W PAC2P39937 518 aa5.38□□□□□ -1.55
RRP17YDR412W COQ11Q05892 277 aa5.38□□□□□ -1.55
RRP17YDR412W YSH1Q06224 779 aaPredicted RBP5.38□□□□□ -1.55
RRP17YDR412W STH1P32597 1359 aa5.38□□□□□ -1.55
RRP17YDR412W GLN4P13188 809 aaKnown RBP5.37□□□□□ -1.55
RRP17YDR412W TUP1P16649 713 aa5.37□□□□□ -1.55
RRP17YDR412W KCC4P25389 1037 aa5.37□□□□□ -1.55
RRP17YDR412W CDS1P38221 457 aa5.37□□□□□ -1.55
RRP17YDR412W CCT5P40413 562 aaKnown RBP5.37□□□□□ -1.55
RRP17YDR412W VBA4Q04602 768 aaKnown RBP5.37□□□□□ -1.55
RRP17YDR412W BMS1Q08965 1183 aaKnown RBP5.37□□□□□ -1.55
RRP17YDR412W YNL162W-AQ3E7A8 72 aa5.37□□□□□ -1.55
RRP17YDR412W YRF1-1P0CX20 1796 aa5.37□□□□□ -1.55
RRP17YDR412W YRF1-5P0CX21 1796 aa5.37□□□□□ -1.55
RRP17YDR412W YRF1-8P0CX22 1796 aa5.37□□□□□ -1.55
RRP17YDR412W STE4P18851 423 aa5.36□□□□□ -1.55
RRP17YDR412W KIN82P25341 720 aa5.36□□□□□ -1.55
RRP17YDR412W ILV6P25605 309 aaKnown RBP5.36□□□□□ -1.55
RRP17YDR412W NMD2P38798 1089 aaKnown RBP5.36□□□□□ -1.55
RRP17YDR412W PMC1P38929 1173 aaPredicted RBP5.36□□□□□ -1.55
RRP17YDR412W TMN3P40071 706 aa5.36□□□□□ -1.55
RRP17YDR412W PMT6P42934 759 aa5.36□□□□□ -1.55
RRP17YDR412W IES1P43579 692 aa5.36□□□□□ -1.55
RRP17YDR412W YGR153WP48238 217 aa5.36□□□□□ -1.55
RRP17YDR412W HLJ1P48353 224 aa5.36□□□□□ -1.55
RRP17YDR412W YDR179W-AQ03983 463 aa5.36□□□□□ -1.55
RRP17YDR412W MRI1Q06489 411 aaKnown RBP5.36□□□□□ -1.55
RRP17YDR412W VTH1P40438 1549 aa5.36□□□□□ -1.55
RRP17YDR412W VTH2P40890 1549 aa5.36□□□□□ -1.55
RRP17YDR412W RPN13O13563 156 aa5.35□□□□□ -1.55
RRP17YDR412W SEC65P29478 273 aa5.35□□□□□ -1.55
RRP17YDR412W CRG1P38892 291 aaRIP-Chip data5.35□□□□□ -1.55not detected
RRP17YDR412W MRK1P50873 501 aa5.35□□□□□ -1.55
RRP17YDR412W YNR029CP53729 429 aaKnown RBP5.35□□□□□ -1.55
RRP17YDR412W HFD1Q04458 532 aa5.35□□□□□ -1.55
RRP17YDR412W MYO4P32492 1471 aa5.34□□□□□ -1.55
RRP17YDR412W SNT2P53127 1403 aa5.34□□□□□ -1.55
RRP17YDR412W ABF1P14164 731 aa5.34□□□□□ -1.55
RRP17YDR412W CDC26P14724 124 aa5.34□□□□□ -1.55
RRP17YDR412W PRE4P30657 266 aa5.34□□□□□ -1.55
RRP17YDR412W OAF3P36023 863 aa5.34□□□□□ -1.55
RRP17YDR412W LEU2P04173 364 aaPredicted RBP5.33□□□□□ -1.56
RRP17YDR412W MTC7P32633 139 aa5.33□□□□□ -1.56
RRP17YDR412W GPP1P41277 250 aaKnown RBP5.33□□□□□ -1.56
RRP17YDR412W TRS23Q03784 219 aa5.33□□□□□ -1.56
RRP17YDR412W UFO1Q04511 668 aa5.33□□□□□ -1.56
RRP17YDR412W HFI1Q12060 488 aa5.33□□□□□ -1.56
RRP17YDR412W SEC15P22224 910 aa5.32□□□□□ -1.56
RRP17YDR412W VPS34P22543 875 aa5.32□□□□□ -1.56
RRP17YDR412W SAT4P25333 603 aaKnown RBP5.32□□□□□ -1.56
RRP17YDR412W DAL3P32459 195 aa5.32□□□□□ -1.56
RRP17YDR412W APL3P38065 1025 aa5.32□□□□□ -1.56
RRP17YDR412W OAF1P39720 1047 aaPredicted RBP5.32□□□□□ -1.56
RRP17YDR412W FTR1P40088 404 aa5.32□□□□□ -1.56
RRP17YDR412W VID28P40547 921 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms