RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C SND1Q04007 877 aa5.37□□□□□ -1.55
NUP42YDR192C PPN1Q04119 674 aa5.37□□□□□ -1.55
NUP42YDR192C DLT1Q04216 342 aa5.37□□□□□ -1.55
NUP42YDR192C YLR407WQ06070 228 aa5.37□□□□□ -1.55
NUP42YDR192C RVB2Q12464 471 aaKnown RBP5.37□□□□□ -1.55
NUP42YDR192C ERG20P08524 352 aaKnown RBP5.36□□□□□ -1.55
NUP42YDR192C RPS21AP0C0V8 87 aaKnown RBP5.36□□□□□ -1.55
NUP42YDR192C THI80P35202 319 aa5.36□□□□□ -1.55
NUP42YDR192C MPT5P39016 859 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
NUP42YDR192C YIR042CP40586 236 aa5.36□□□□□ -1.55
NUP42YDR192C HOL1P53389 586 aa5.36□□□□□ -1.55
NUP42YDR192C NOP15P53927 220 aaPredicted RBP5.36□□□□□ -1.55
NUP42YDR192C HMO1Q03973 246 aaKnown RBP5.36□□□□□ -1.55
NUP42YDR192C VHS3Q08438 674 aa5.36□□□□□ -1.55
NUP42YDR192C SGO1Q08490 590 aa5.36□□□□□ -1.55
NUP42YDR192C RPS17AP02407 136 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C LAT1P12695 482 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C RPS17BP14127 136 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C HCA4P20448 770 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C PRP22P24384 1145 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C IMG2P25642 146 aaPredicted RBP5.35□□□□□ -1.55
NUP42YDR192C HSP104P31539 908 aaKnown RBP5.35□□□□□ -1.55
NUP42YDR192C HEM12P32347 362 aaPredicted RBP5.35□□□□□ -1.55
NUP42YDR192C YKU70P32807 602 aa5.35□□□□□ -1.55
NUP42YDR192C YHR112CP38716 378 aa5.35□□□□□ -1.55
NUP42YDR192C DUN1P39009 513 aa5.35□□□□□ -1.55
NUP42YDR192C ISA1Q07821 250 aaPredicted RBP5.35□□□□□ -1.55
NUP42YDR192C DIA2Q08496 732 aaPredicted RBP5.35□□□□□ -1.55
NUP42YDR192C TGL5Q12043 749 aa5.35□□□□□ -1.55
NUP42YDR192C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
NUP42YDR192C PMA1P05030 918 aaKnown RBP5.34□□□□□ -1.55
NUP42YDR192C CAF20P12962 161 aaKnown RBP5.34□□□□□ -1.55
NUP42YDR192C DAL3P32459 195 aa5.34□□□□□ -1.55
NUP42YDR192C FKH2P41813 862 aa5.34□□□□□ -1.55
NUP42YDR192C DAS1P47005 663 aa5.34□□□□□ -1.55
NUP42YDR192C LYS4P49367 693 aaPredicted RBP5.34□□□□□ -1.55
NUP42YDR192C TAN1P53072 289 aaPredicted RBP5.34□□□□□ -1.55
NUP42YDR192C TEX1P53851 422 aaKnown RBP5.34□□□□□ -1.55
NUP42YDR192C ERG5P54781 538 aa5.34□□□□□ -1.55
NUP42YDR192C LEE1Q02799 301 aaKnown RBP5.34□□□□□ -1.55
NUP42YDR192C NSE5Q03718 556 aa5.34□□□□□ -1.55
NUP42YDR192C VBA4Q04602 768 aaKnown RBP5.34□□□□□ -1.55
NUP42YDR192C NYV1Q12255 253 aa5.34□□□□□ -1.55
NUP42YDR192C FRS1P15624 595 aaKnown RBP5.33□□□□□ -1.56
NUP42YDR192C ACO1P19414 778 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
NUP42YDR192C SUI2P20459 304 aaKnown RBP5.33□□□□□ -1.56
NUP42YDR192C SEC6P32844 805 aa5.33□□□□□ -1.56
NUP42YDR192C NIC96P34077 839 aa5.33□□□□□ -1.56
NUP42YDR192C KTR4P38131 464 aa5.33□□□□□ -1.56
NUP42YDR192C FAT1P38225 669 aa5.33□□□□□ -1.56
NUP42YDR192C SRP68P38687 599 aaKnown RBP5.33□□□□□ -1.56
NUP42YDR192C IES1P43579 692 aa5.33□□□□□ -1.56
NUP42YDR192C COX18P53239 316 aa5.33□□□□□ -1.56
NUP42YDR192C NRD1P53617 575 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
NUP42YDR192C ECM16Q04217 1267 aaKnown RBP5.33□□□□□ -1.56
NUP42YDR192C AIM39Q08223 395 aa5.33□□□□□ -1.56
NUP42YDR192C URB1P34241 1764 aaKnown RBP5.32□□□□□ -1.56
NUP42YDR192C SST2P11972 698 aaKnown RBP5.32□□□□□ -1.56
NUP42YDR192C RNR1P21524 888 aaKnown RBP5.32□□□□□ -1.56
NUP42YDR192C SEC15P22224 910 aa5.32□□□□□ -1.56
NUP42YDR192C KIN82P25341 720 aa5.32□□□□□ -1.56
NUP42YDR192C HCM1P25364 564 aa5.32□□□□□ -1.56
NUP42YDR192C KCC4P25389 1037 aa5.32□□□□□ -1.56
NUP42YDR192C DGR2P32330 852 aa5.32□□□□□ -1.56
NUP42YDR192C YKL133CP36066 463 aa5.32□□□□□ -1.56
NUP42YDR192C UBP5P39944 805 aa5.32□□□□□ -1.56
NUP42YDR192C ELO3P40319 345 aa5.32□□□□□ -1.56
NUP42YDR192C VID28P40547 921 aa5.32□□□□□ -1.56
NUP42YDR192C BAP3P41815 604 aa5.32□□□□□ -1.56
NUP42YDR192C PXA1P41909 870 aa5.32□□□□□ -1.56
NUP42YDR192C ATG36P46983 293 aa5.32□□□□□ -1.56
NUP42YDR192C RRP46P53256 223 aaPredicted RBP5.32□□□□□ -1.56
NUP42YDR192C YNL034WP53963 612 aa5.32□□□□□ -1.56
NUP42YDR192C YNL018CP53976 612 aa5.32□□□□□ -1.56
NUP42YDR192C CLF1Q12309 687 aaPredicted RBP5.32□□□□□ -1.56
NUP42YDR192C EDE1P34216 1381 aa5.31□□□□□ -1.56
NUP42YDR192C AUS1Q08409 1394 aa5.31□□□□□ -1.56
NUP42YDR192C GLN4P13188 809 aaKnown RBP5.31□□□□□ -1.56
NUP42YDR192C SER1P33330 395 aaKnown RBP5.31□□□□□ -1.56
NUP42YDR192C CCT3P39077 534 aaKnown RBP5.31□□□□□ -1.56
NUP42YDR192C MRPS35P53292 345 aa5.31□□□□□ -1.56
NUP42YDR192C MDG1P53885 366 aa5.31□□□□□ -1.56
NUP42YDR192C TGL2P54857 326 aa5.31□□□□□ -1.56
NUP42YDR192C VMS1Q04311 632 aaKnown RBP5.31□□□□□ -1.56
NUP42YDR192C THI22Q06490 572 aa5.31□□□□□ -1.56
NUP42YDR192C YOR378WQ08902 515 aa5.31□□□□□ -1.56
NUP42YDR192C LAS17Q12446 633 aa5.31□□□□□ -1.56
NUP42YDR192C SIR4P11978 1358 aa5.3□□□□□ -1.56
NUP42YDR192C SUP35P05453 685 aaKnown RBP5.3□□□□□ -1.56
NUP42YDR192C PEX1P24004 1043 aa5.3□□□□□ -1.56
NUP42YDR192C CTS1P29029 562 aa5.3□□□□□ -1.56
NUP42YDR192C EFT1P32324 842 aaKnown RBP5.3□□□□□ -1.56
NUP42YDR192C MF(ALPHA)2P32435 120 aa5.3□□□□□ -1.56
NUP42YDR192C HIR1P32479 840 aa5.3□□□□□ -1.56
NUP42YDR192C IRC24P40580 263 aa5.3□□□□□ -1.56
NUP42YDR192C RSC8P43609 557 aaKnown RBP5.3□□□□□ -1.56
NUP42YDR192C NOP9P47077 666 aaKnown RBP5.3□□□□□ -1.56
NUP42YDR192C MUP1P50276 574 aa5.3□□□□□ -1.56
NUP42YDR192C CNM67P53865 581 aaKnown RBP5.3□□□□□ -1.56
NUP42YDR192C YPS7Q06325 596 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms