RNA–Protein interactions for RNA: YDR092W

UBC13, Transcript of E2 ubiquitin-conjugating enzyme, yeast

Gene UBC13, Length 462 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC13	YDR092W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
UBC13	YDR092W	TSR4	P25040	408 aa		4.13	□□□□□ -1.75
UBC13	YDR092W	EUG1	P32474	517 aa		4.13	□□□□□ -1.75
UBC13	YDR092W	PAF1	P38351	445 aa		4.13	□□□□□ -1.75
UBC13	YDR092W	SRP68	P38687	599 aa	Known RBP	4.13	□□□□□ -1.75
UBC13	YDR092W	MUP3	P38734	546 aa		4.13	□□□□□ -1.75
UBC13	YDR092W	YHR097C	P38809	366 aa	Known RBP	4.13	□□□□□ -1.75
UBC13	YDR092W	NGL2	Q03264	515 aa	Known RBP	4.13	□□□□□ -1.75
UBC13	YDR092W	RKI1	Q12189	258 aa		4.13	□□□□□ -1.75
UBC13	YDR092W	TUB1	P09733	447 aa	Known RBP	4.12	□□□□□ -1.75
UBC13	YDR092W	CDC26	P14724	124 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	MRC1	P25588	1096 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	PPZ2	P33329	710 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	DHR2	P36009	735 aa	Predicted RBP	4.12	□□□□□ -1.75
UBC13	YDR092W	YBR071W	P38243	211 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	YHR033W	P38690	423 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	PRM2	P40534	656 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	NIT2	P47016	307 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	SLD3	P53135	668 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	SPC105	P53148	917 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	NMA2	P53204	395 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	DIP5	P53388	608 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	SUT2	Q12286	268 aa		4.12	□□□□□ -1.75
UBC13	YDR092W	ADY2	P25613	283 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	CUE2	P36075	443 aa	Known RBP	4.11	□□□□□ -1.75
UBC13	YDR092W	CRG1	P38892	291 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
UBC13	YDR092W	PAC2	P39937	518 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	YEL025C	P39991	1188 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	TMN3	P40071	706 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	FTR1	P40088	404 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	ATG36	P46983	293 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	NDJ1	Q12366	352 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	TMA17	Q12513	150 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	LAM4	P38800	1345 aa		4.11	□□□□□ -1.75
UBC13	YDR092W	SSB1	P11484	613 aa	Known RBP	4.1	□□□□□ -1.75
UBC13	YDR092W	ELF1	P36053	145 aa		4.1	□□□□□ -1.75
UBC13	YDR092W	PEA2	P40091	420 aa		4.1	□□□□□ -1.75
UBC13	YDR092W	SSB2	P40150	613 aa	Known RBP	4.1	□□□□□ -1.75
UBC13	YDR092W	ATF1	P40353	525 aa		4.1	□□□□□ -1.75
UBC13	YDR092W	PMT6	P42934	759 aa		4.1	□□□□□ -1.75
UBC13	YDR092W	ARO10	Q06408	635 aa		4.1	□□□□□ -1.75
UBC13	YDR092W	NGL1	Q08213	363 aa	Known RBP	4.1	□□□□□ -1.75
UBC13	YDR092W	SLK19	Q08581	821 aa	Known RBP	4.1	□□□□□ -1.75
UBC13	YDR092W	MDM20	Q12387	796 aa	Known RBP	4.1	□□□□□ -1.75
UBC13	YDR092W	HXT4	P32467	576 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	EMP70	P32802	667 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	YMC2	P38087	329 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	PIH1	P38768	344 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	PPE1	P38796	400 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	RIX1	P38883	763 aa	Predicted RBP	4.09	□□□□□ -1.75
UBC13	YDR092W	YGR054W	P53235	642 aa	Known RBP	4.09	□□□□□ -1.75
UBC13	YDR092W	HOL1	P53389	586 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	SNF12	P53628	566 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	SQS1	P53866	767 aa	Known RBP	4.09	□□□□□ -1.75
UBC13	YDR092W	YDR179W-A	Q03983	463 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	YCG1	Q06680	1035 aa		4.09	□□□□□ -1.75
UBC13	YDR092W	HMG2	P12684	1045 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	COX11	P19516	300 aa	Known RBP	4.08	□□□□□ -1.76
UBC13	YDR092W	RPA135	P22138	1203 aa	Known RBP	4.08	□□□□□ -1.76
UBC13	YDR092W	CAP1	P28495	268 aa	Known RBP	4.08	□□□□□ -1.76
UBC13	YDR092W	DAL3	P32459	195 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	CDS1	P38221	457 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	PEF1	P53238	335 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	PEX15	Q08215	383 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	VPS5	Q92331	675 aa		4.08	□□□□□ -1.76
UBC13	YDR092W	PHO5	P00635	467 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	TPK2	P06245	380 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	SEC12	P11655	471 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	KAR1	P11927	433 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	TUP1	P16649	713 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	SAT4	P25333	603 aa	Known RBP	4.07	□□□□□ -1.76
UBC13	YDR092W	CWH43	P25618	953 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	MTC7	P32633	139 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	UGP1	P32861	499 aa	Known RBP	4.07	□□□□□ -1.76
UBC13	YDR092W	YPT53	P36019	220 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	SSP120	P39931	234 aa	Known RBP	4.07	□□□□□ -1.76
UBC13	YDR092W	IRC5	P43610	853 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	MFM1	Q02783	413 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	EFR3	Q03653	782 aa	Known RBP	4.07	□□□□□ -1.76
UBC13	YDR092W	COQ11	Q05892	277 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	YDL073W	Q07454	984 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	YPL216W	Q08964	1102 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	TGS1	Q12052	315 aa		4.07	□□□□□ -1.76
UBC13	YDR092W	BNR1	P40450	1375 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	YEL076C-A	P0CX16	216 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	YLR464W	P0CX17	216 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	STE4	P18851	423 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	ATP12	P22135	325 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	HEM12	P32347	362 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC13	YDR092W	SER1	P33330	395 aa	Known RBP	4.06	□□□□□ -1.76
UBC13	YDR092W	LOT5	P34234	306 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	PMC1	P38929	1173 aa	Predicted RBP	4.06	□□□□□ -1.76
UBC13	YDR092W	YEL076C	P39971	216 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	MIT1	P40002	666 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	LRO1	P40345	661 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	IMO32	P53219	342 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	COG6	P53959	839 aa		4.06	□□□□□ -1.76
UBC13	YDR092W	ADE5,7	P07244	802 aa	Known RBP	4.05	□□□□□ -1.76
UBC13	YDR092W	STE12	P13574	688 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms