RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W PRP4P20053 465 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W PRE10P21242 288 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
MSH5YDL154W PRP22P24384 1145 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W KIN82P25341 720 aa2.07□□□□□ -2.08
MSH5YDL154W KCC4P25389 1037 aa2.07□□□□□ -2.08
MSH5YDL154W PTP2P29461 750 aa2.07□□□□□ -2.08
MSH5YDL154W MVD1P32377 396 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W PET127P32606 800 aa2.07□□□□□ -2.08
MSH5YDL154W SER1P33330 395 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W FAT1P38225 669 aa2.07□□□□□ -2.08
MSH5YDL154W ECM1P39715 212 aa2.07□□□□□ -2.08
MSH5YDL154W YNL195CP40168 261 aa2.07□□□□□ -2.08
MSH5YDL154W VPS27P40343 622 aaKnown RBP2.07□□□□□ -2.08
MSH5YDL154W IRC24P40580 263 aa2.07□□□□□ -2.08
MSH5YDL154W NOP15P53927 220 aaPredicted RBP2.07□□□□□ -2.08
MSH5YDL154W ARG5,6Q01217 863 aa2.07□□□□□ -2.08
MSH5YDL154W MET14Q02196 202 aa2.07□□□□□ -2.08
MSH5YDL154W APM4Q99186 491 aa2.07□□□□□ -2.08
MSH5YDL154W PRP6P19735 899 aaPredicted RBP2.06□□□□□ -2.08
MSH5YDL154W CTF13P35203 478 aa2.06□□□□□ -2.08
MSH5YDL154W ENP1P38333 483 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W AMA1P50082 593 aa2.06□□□□□ -2.08
MSH5YDL154W SPO1P53541 631 aa2.06□□□□□ -2.08
MSH5YDL154W TEX1P53851 422 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W LEE1Q02799 301 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W MLC2Q06580 163 aa2.06□□□□□ -2.08
MSH5YDL154W NGL1Q08213 363 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W YOR378WQ08902 515 aa2.06□□□□□ -2.08
MSH5YDL154W CWC2Q12046 339 aaPredicted RBP2.06□□□□□ -2.08
MSH5YDL154W NUR1Q12066 484 aa2.06□□□□□ -2.08
MSH5YDL154W ATG11Q12527 1178 aa2.06□□□□□ -2.08
MSH5YDL154W RNR1P21524 888 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W HCM1P25364 564 aa2.06□□□□□ -2.08
MSH5YDL154W HRR25P29295 494 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W HXT4P32467 576 aa2.06□□□□□ -2.08
MSH5YDL154W MRS6P32864 603 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W PTH2P34222 208 aa2.06□□□□□ -2.08
MSH5YDL154W KTR4P38131 464 aa2.06□□□□□ -2.08
MSH5YDL154W YHR112CP38716 378 aa2.06□□□□□ -2.08
MSH5YDL154W PIG2P40187 538 aa2.06□□□□□ -2.08
MSH5YDL154W YIL092WP40497 633 aa2.06□□□□□ -2.08
MSH5YDL154W TAF4P50105 388 aa2.06□□□□□ -2.08
MSH5YDL154W URN1Q06525 465 aaKnown RBP2.06□□□□□ -2.08
MSH5YDL154W HIM1Q06674 414 aa2.06□□□□□ -2.08
MSH5YDL154W AIM41Q12032 185 aa2.06□□□□□ -2.08
MSH5YDL154W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
MSH5YDL154W TAO3P40468 2376 aa2.05□□□□□ -2.08
MSH5YDL154W LST4P34239 828 aa2.05□□□□□ -2.08
MSH5YDL154W DRE2P36152 348 aa2.05□□□□□ -2.08
MSH5YDL154W REV7P38927 245 aa2.05□□□□□ -2.08
MSH5YDL154W ELO3P40319 345 aa2.05□□□□□ -2.08
MSH5YDL154W HIS6P40545 261 aa2.05□□□□□ -2.08
MSH5YDL154W FAF1P40546 346 aaPredicted RBP2.05□□□□□ -2.08
MSH5YDL154W PIP2P52960 996 aa2.05□□□□□ -2.08
MSH5YDL154W CLU1Q03690 1277 aaKnown RBP2.05□□□□□ -2.08
MSH5YDL154W OMS1Q06668 471 aa2.05□□□□□ -2.08
MSH5YDL154W VPS36Q06696 566 aa2.05□□□□□ -2.08
MSH5YDL154W PSF3Q12146 194 aa2.05□□□□□ -2.08
MSH5YDL154W TOP1P04786 769 aa2.05□□□□□ -2.08
MSH5YDL154W LAT1P12695 482 aaKnown RBP2.05□□□□□ -2.08
MSH5YDL154W PHO3P24031 467 aa2.05□□□□□ -2.08
MSH5YDL154W DPB3P27344 201 aa2.05□□□□□ -2.08
MSH5YDL154W TAF5P38129 798 aa2.05□□□□□ -2.08
MSH5YDL154W RSC8P43609 557 aaKnown RBP2.05□□□□□ -2.08
MSH5YDL154W ASK10P48361 1146 aa2.05□□□□□ -2.08
MSH5YDL154W SUB1P54000 292 aaKnown RBP2.05□□□□□ -2.08
MSH5YDL154W CLF1Q12309 687 aaPredicted RBP2.05□□□□□ -2.08
MSH5YDL154W YSP2Q06681 1438 aa2.05□□□□□ -2.08
MSH5YDL154W YEL076C-AP0CX16 216 aa2.04□□□□□ -2.08
MSH5YDL154W YLR464WP0CX17 216 aa2.04□□□□□ -2.08
MSH5YDL154W SEC12P11655 471 aa2.04□□□□□ -2.08
MSH5YDL154W MSH1P25846 959 aa2.04□□□□□ -2.08
MSH5YDL154W TSA1P34760 196 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W SRP68P38687 599 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W CCT3P39077 534 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W YEL076CP39971 216 aa2.04□□□□□ -2.08
MSH5YDL154W YIL077CP40508 320 aa2.04□□□□□ -2.08
MSH5YDL154W ATG36P46983 293 aa2.04□□□□□ -2.08
MSH5YDL154W MTL1P53214 551 aa2.04□□□□□ -2.08
MSH5YDL154W PAP2P53632 584 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W UBX4P54730 416 aa2.04□□□□□ -2.08
MSH5YDL154W ZDS2P54786 942 aa2.04□□□□□ -2.08
MSH5YDL154W ATG16Q03818 150 aa2.04□□□□□ -2.08
MSH5YDL154W YPS7Q06325 596 aa2.04□□□□□ -2.08
MSH5YDL154W STP4Q07351 490 aa2.04□□□□□ -2.08
MSH5YDL154W HOS1Q12214 470 aa2.04□□□□□ -2.08
MSH5YDL154W POM34Q12445 299 aa2.04□□□□□ -2.08
MSH5YDL154W YIL177CP40434 1758 aa2.04□□□□□ -2.08
MSH5YDL154W YJL225CP40889 1758 aa2.04□□□□□ -2.08
MSH5YDL154W GAL1P04385 528 aa2.04□□□□□ -2.08
MSH5YDL154W TRP4P07285 380 aaPredicted RBP2.04□□□□□ -2.08
MSH5YDL154W PGI1P12709 554 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W ATP12P22135 325 aa2.04□□□□□ -2.08
MSH5YDL154W ERG4P25340 473 aa2.04□□□□□ -2.08
MSH5YDL154W EFT1P32324 842 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W SHM2P37291 469 aaKnown RBP2.04□□□□□ -2.08
MSH5YDL154W SUL1P38359 859 aa2.04□□□□□ -2.08
MSH5YDL154W PPE1P38796 400 aa2.04□□□□□ -2.08
MSH5YDL154W STL1P39932 569 aa2.04□□□□□ -2.08
MSH5YDL154W EAF5P39995 279 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms