RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W YIL166CP40445 542 aa5.07□□□□□ -1.6
KIN28YDL108W GZF3P42944 551 aaKnown RBP5.07□□□□□ -1.6
KIN28YDL108W IML2P47031 731 aa5.07□□□□□ -1.6
KIN28YDL108W SHE10P53075 577 aa5.07□□□□□ -1.6
KIN28YDL108W YNL034WP53963 612 aa5.07□□□□□ -1.6
KIN28YDL108W YNL018CP53976 612 aa5.07□□□□□ -1.6
KIN28YDL108W TGL2P54857 326 aa5.07□□□□□ -1.6
KIN28YDL108W GPR1Q12361 961 aa5.07□□□□□ -1.6
KIN28YDL108W TUF1P02992 437 aaKnown RBP5.06□□□□□ -1.6
KIN28YDL108W GAL1P04385 528 aa5.06□□□□□ -1.6
KIN28YDL108W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
KIN28YDL108W YKR075CP36155 307 aa5.06□□□□□ -1.6
KIN28YDL108W APT2P36973 181 aa5.06□□□□□ -1.6
KIN28YDL108W NOP4P37838 685 aaKnown RBP5.06□□□□□ -1.6
KIN28YDL108W MIP6P38760 659 aaKnown RBP5.06□□□□□ -1.6
KIN28YDL108W SGM1P47166 707 aa5.06□□□□□ -1.6
KIN28YDL108W PRP31P49704 494 aaPredicted RBP5.06□□□□□ -1.6
KIN28YDL108W TAN1P53072 289 aaPredicted RBP5.06□□□□□ -1.6
KIN28YDL108W YNL247WP53852 767 aaKnown RBP5.06□□□□□ -1.6
KIN28YDL108W NCS2P53923 493 aaPredicted RBP5.06□□□□□ -1.6
KIN28YDL108W COG6P53959 839 aa5.06□□□□□ -1.6
KIN28YDL108W PTA1Q01329 785 aaPredicted RBP5.06□□□□□ -1.6
KIN28YDL108W NRG1Q03125 231 aa5.06□□□□□ -1.6
KIN28YDL108W SSP2Q08646 371 aa5.06□□□□□ -1.6
KIN28YDL108W TRE2Q08693 809 aa5.06□□□□□ -1.6
KIN28YDL108W SMC6Q12749 1114 aa5.06□□□□□ -1.6
KIN28YDL108W YMR084WA2P2R3 262 aa5.05□□□□□ -1.6
KIN28YDL108W PHO84P25297 587 aaKnown RBP5.05□□□□□ -1.6
KIN28YDL108W CTS1P29029 562 aa5.05□□□□□ -1.6
KIN28YDL108W SMY1P32364 656 aaKnown RBP5.05□□□□□ -1.6
KIN28YDL108W TFC4P33339 1025 aa5.05□□□□□ -1.6
KIN28YDL108W CTF13P35203 478 aa5.05□□□□□ -1.6
KIN28YDL108W YBR071WP38243 211 aa5.05□□□□□ -1.6
KIN28YDL108W YBR259WP38338 688 aa5.05□□□□□ -1.6
KIN28YDL108W SRP72P38688 640 aaKnown RBP5.05□□□□□ -1.6
KIN28YDL108W RRF1P38771 230 aa5.05□□□□□ -1.6
KIN28YDL108W OAF1P39720 1047 aaPredicted RBP5.05□□□□□ -1.6
KIN28YDL108W RTT105P40063 208 aa5.05□□□□□ -1.6
KIN28YDL108W JEM1P40358 645 aa5.05□□□□□ -1.6
KIN28YDL108W OCA1P50946 238 aaPredicted RBP5.05□□□□□ -1.6
KIN28YDL108W VID30P53076 958 aa5.05□□□□□ -1.6
KIN28YDL108W ARP4P80428 489 aa5.05□□□□□ -1.6
KIN28YDL108W GPD1Q00055 391 aaKnown RBP5.05□□□□□ -1.6
KIN28YDL108W YDL073WQ07454 984 aa5.05□□□□□ -1.6
KIN28YDL108W RRP6Q12149 733 aaKnown RBP5.05□□□□□ -1.6
KIN28YDL108W RRG1Q12167 365 aaPredicted RBP5.05□□□□□ -1.6
KIN28YDL108W RED1P14291 827 aa5.04□□□□□ -1.6
KIN28YDL108W DBF20P32328 564 aa5.04□□□□□ -1.6
KIN28YDL108W DCG1P32460 244 aa5.04□□□□□ -1.6
KIN28YDL108W FKH2P41813 862 aa5.04□□□□□ -1.6
KIN28YDL108W FYV8P46949 817 aaKnown RBP5.04□□□□□ -1.6
KIN28YDL108W SPO1P53541 631 aa5.04□□□□□ -1.6
KIN28YDL108W SEC5P89102 971 aa5.04□□□□□ -1.6
KIN28YDL108W PNG1Q02890 363 aa5.04□□□□□ -1.6
KIN28YDL108W GAD1Q04792 585 aa5.04□□□□□ -1.6
KIN28YDL108W ATG38Q05789 226 aaKnown RBP5.04□□□□□ -1.6
KIN28YDL108W YLH47Q06493 454 aa5.04□□□□□ -1.6
KIN28YDL108W DCS2Q12123 353 aa5.04□□□□□ -1.6
KIN28YDL108W HCM1P25364 564 aa5.03□□□□□ -1.6
KIN28YDL108W IMP2'P32351 346 aa5.03□□□□□ -1.6
KIN28YDL108W PLC1P32383 869 aa5.03□□□□□ -1.6
KIN28YDL108W EUG1P32474 517 aa5.03□□□□□ -1.6
KIN28YDL108W NIC96P34077 839 aa5.03□□□□□ -1.6
KIN28YDL108W CCL1P37366 393 aa5.03□□□□□ -1.6
KIN28YDL108W APN2P38207 520 aa5.03□□□□□ -1.6
KIN28YDL108W PCL7P40186 285 aa5.03□□□□□ -1.6
KIN28YDL108W CCT5P40413 562 aaKnown RBP5.03□□□□□ -1.6
KIN28YDL108W MNN11P46985 422 aaKnown RBP5.03□□□□□ -1.6
KIN28YDL108W YJR039WP47107 1121 aa5.03□□□□□ -1.6
KIN28YDL108W YLR287CQ05881 355 aa5.03□□□□□ -1.6
KIN28YDL108W GGA1Q06336 557 aa5.03□□□□□ -1.6
KIN28YDL108W LAS17Q12446 633 aa5.03□□□□□ -1.6
KIN28YDL108W ENT1Q12518 454 aa5.03□□□□□ -1.6
KIN28YDL108W HSH49Q99181 213 aaPredicted RBP5.03□□□□□ -1.6
KIN28YDL108W PMA1P05030 918 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W TRP4P07285 380 aaPredicted RBP5.02□□□□□ -1.61
KIN28YDL108W MET3P08536 511 aa5.02□□□□□ -1.61
KIN28YDL108W MRP7P12687 371 aa5.02□□□□□ -1.61
KIN28YDL108W HOM2P13663 365 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W APA1P16550 321 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W SPO16P17122 198 aa5.02□□□□□ -1.61
KIN28YDL108W CLN1P20437 546 aa5.02□□□□□ -1.61
KIN28YDL108W MRPL25P23369 157 aa5.02□□□□□ -1.61
KIN28YDL108W DAL80P26343 269 aa5.02□□□□□ -1.61
KIN28YDL108W ORC2P32833 620 aa5.02□□□□□ -1.61
KIN28YDL108W RIB7P33312 244 aa5.02□□□□□ -1.61
KIN28YDL108W CNS1P33313 385 aa5.02□□□□□ -1.61
KIN28YDL108W SHM2P37291 469 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W UBS1P38290 277 aa5.02□□□□□ -1.61
KIN28YDL108W BCD1P38772 366 aa5.02□□□□□ -1.61
KIN28YDL108W SSZ1P38788 538 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W ECM1P39715 212 aa5.02□□□□□ -1.61
KIN28YDL108W YER034WP40022 185 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W MNP1P53163 194 aaPredicted RBP5.02□□□□□ -1.61
KIN28YDL108W MRPS35P53292 345 aa5.02□□□□□ -1.61
KIN28YDL108W PAP2P53632 584 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W HST1P53685 503 aa5.02□□□□□ -1.61
KIN28YDL108W BRE5P53741 515 aaKnown RBP5.02□□□□□ -1.61
KIN28YDL108W ALF1P53904 254 aa5.02□□□□□ -1.61
KIN28YDL108W ECM9Q02202 377 aa5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms