RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP16	YDL004W	PMT6	P42934	759 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	YGL081W	P53156	320 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	SNF12	P53628	566 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	YML122C	Q03207	126 aa		4.7	□□□□□ -1.66
ATP16	YDL004W	DGR2	P32330	852 aa		4.69	□□□□□ -1.66
ATP16	YDL004W	SER1	P33330	395 aa	Known RBP	4.69	□□□□□ -1.66
ATP16	YDL004W	YMC2	P38087	329 aa		4.69	□□□□□ -1.66
ATP16	YDL004W	CRG1	P38892	291 aa	RIP-Chip data	4.69	□□□□□ -1.66	not detected
ATP16	YDL004W	UFO1	Q04511	668 aa		4.69	□□□□□ -1.66
ATP16	YDL004W	ARO10	Q06408	635 aa		4.69	□□□□□ -1.66
ATP16	YDL004W	BMS1	Q08965	1183 aa	Known RBP	4.69	□□□□□ -1.66
ATP16	YDL004W	RPN13	O13563	156 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	PHO5	P00635	467 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	ATP12	P22135	325 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	YPT53	P36019	220 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	CDS1	P38221	457 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	PPE1	P38796	400 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	FTR1	P40088	404 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	PRM2	P40534	656 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	RNR4	P49723	345 aa	Known RBP	4.68	□□□□□ -1.66
ATP16	YDL004W	NSE5	Q03718	556 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	TRS23	Q03784	219 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	YPR027C	Q12079	277 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	MDM20	Q12387	796 aa	Known RBP	4.68	□□□□□ -1.66
ATP16	YDL004W	RMP1	Q12530	201 aa		4.68	□□□□□ -1.66
ATP16	YDL004W	RPA135	P22138	1203 aa	Known RBP	4.67	□□□□□ -1.66
ATP16	YDL004W	TSR4	P25040	408 aa		4.67	□□□□□ -1.66
ATP16	YDL004W	HXT4	P32467	576 aa		4.67	□□□□□ -1.66
ATP16	YDL004W	EUG1	P32474	517 aa		4.67	□□□□□ -1.66
ATP16	YDL004W	GRX4	P32642	244 aa		4.67	□□□□□ -1.66
ATP16	YDL004W	PMC1	P38929	1173 aa	Predicted RBP	4.67	□□□□□ -1.66
ATP16	YDL004W	GPP2	P40106	250 aa	Known RBP	4.67	□□□□□ -1.66
ATP16	YDL004W	FDC1	Q03034	503 aa		4.67	□□□□□ -1.66
ATP16	YDL004W	MF(ALPHA)2	P32435	120 aa		4.66	□□□□□ -1.66
ATP16	YDL004W	EHT1	P38295	451 aa		4.66	□□□□□ -1.66
ATP16	YDL004W	DUG1	P43616	481 aa	Known RBP	4.66	□□□□□ -1.66
ATP16	YDL004W	ASN1	P49089	572 aa	Known RBP	4.66	□□□□□ -1.66
ATP16	YDL004W	NGL2	Q03264	515 aa	Known RBP	4.66	□□□□□ -1.66
ATP16	YDL004W	SKY1	Q03656	742 aa		4.66	□□□□□ -1.66
ATP16	YDL004W	YDR179W-A	Q03983	463 aa		4.66	□□□□□ -1.66
ATP16	YDL004W	NGL1	Q08213	363 aa	Known RBP	4.66	□□□□□ -1.66
ATP16	YDL004W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
ATP16	YDL004W	TMA17	Q12513	150 aa		4.66	□□□□□ -1.66
ATP16	YDL004W	STE4	P18851	423 aa		4.65	□□□□□ -1.67
ATP16	YDL004W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.67	not detected
ATP16	YDL004W	YJR120W	P47157	116 aa		4.65	□□□□□ -1.67
ATP16	YDL004W	IMO32	P53219	342 aa		4.65	□□□□□ -1.67
ATP16	YDL004W	YGR054W	P53235	642 aa	Known RBP	4.65	□□□□□ -1.67
ATP16	YDL004W	YCG1	Q06680	1035 aa		4.65	□□□□□ -1.67
ATP16	YDL004W	NDJ1	Q12366	352 aa		4.65	□□□□□ -1.67
ATP16	YDL004W	AEP2	P22136	580 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	ILV6	P25605	309 aa	Known RBP	4.64	□□□□□ -1.67
ATP16	YDL004W	MTC7	P32633	139 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	MRPL7	P36519	292 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	NIT2	P47016	307 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	ENP2	P48234	707 aa	Known RBP	4.64	□□□□□ -1.67
ATP16	YDL004W	MFM1	Q02783	413 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	TRE2	Q08693	809 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	AIM41	Q12032	185 aa		4.64	□□□□□ -1.67
ATP16	YDL004W	TPK2	P06245	380 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	HMG2	P12684	1045 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	SAT4	P25333	603 aa	Known RBP	4.63	□□□□□ -1.67
ATP16	YDL004W	RMA1	P36001	430 aa	Known RBP	4.63	□□□□□ -1.67
ATP16	YDL004W	PAC2	P39937	518 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	SPC105	P53148	917 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	DAK1	P54838	584 aa	Known RBP	4.63	□□□□□ -1.67
ATP16	YDL004W	FMP30	Q02883	468 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	EFR3	Q03653	782 aa	Known RBP	4.63	□□□□□ -1.67
ATP16	YDL004W	HLR1	Q04429	423 aa		4.63	□□□□□ -1.67
ATP16	YDL004W	YMC1	P32331	307 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	YEL025C	P39991	1188 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	PEA2	P40091	420 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	THI6	P41835	540 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	YDL183C	P48569	320 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	MRK1	P50873	501 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	YIP4	P53093	235 aa		4.62	□□□□□ -1.67
ATP16	YDL004W	SQS1	P53866	767 aa	Known RBP	4.62	□□□□□ -1.67
ATP16	YDL004W	ADE5,7	P07244	802 aa	Known RBP	4.61	□□□□□ -1.67
ATP16	YDL004W	YEL076C-A	P0CX16	216 aa		4.61	□□□□□ -1.67
ATP16	YDL004W	YLR464W	P0CX17	216 aa		4.61	□□□□□ -1.67
ATP16	YDL004W	UGP1	P32861	499 aa	Known RBP	4.61	□□□□□ -1.67
ATP16	YDL004W	YBR071W	P38243	211 aa		4.61	□□□□□ -1.67
ATP16	YDL004W	YEL076C	P39971	216 aa		4.61	□□□□□ -1.67
ATP16	YDL004W	CEF1	Q03654	590 aa	Predicted RBP	4.61	□□□□□ -1.67
ATP16	YDL004W	THI7	Q05998	598 aa		4.61	□□□□□ -1.67
ATP16	YDL004W	COX11	P19516	300 aa	Known RBP	4.6	□□□□□ -1.67
ATP16	YDL004W	RIM4	P38741	713 aa		4.6	□□□□□ -1.67
ATP16	YDL004W	ECM38	Q05902	660 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP16	YDL004W	SLK19	Q08581	821 aa	Known RBP	4.6	□□□□□ -1.67
ATP16	YDL004W	YPL216W	Q08964	1102 aa		4.6	□□□□□ -1.67
ATP16	YDL004W	CWC2	Q12046	339 aa	Predicted RBP	4.6	□□□□□ -1.67
ATP16	YDL004W	ULA1	Q12059	462 aa		4.6	□□□□□ -1.67
ATP16	YDL004W	VPS34	P22543	875 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	DHR2	P36009	735 aa	Predicted RBP	4.59	□□□□□ -1.67
ATP16	YDL004W	SRP68	P38687	599 aa	Known RBP	4.59	□□□□□ -1.67
ATP16	YDL004W	PIH1	P38768	344 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	EAF5	P39995	279 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	LRO1	P40345	661 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	IRC5	P43610	853 aa		4.59	□□□□□ -1.67
ATP16	YDL004W	COG6	P53959	839 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms