RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W RPS17BP14127 136 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W CMP2P14747 604 aa3.25□□□□□ -1.89
SWD3YBR175W CBP3P21560 335 aa3.25□□□□□ -1.89
SWD3YBR175W MCM3P24279 971 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W POA1P38218 177 aa3.25□□□□□ -1.89
SWD3YBR175W IFA38P38286 347 aa3.25□□□□□ -1.89
SWD3YBR175W SRP72P38688 640 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W STT3P39007 718 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W YEL076CP39971 216 aa3.25□□□□□ -1.89
SWD3YBR175W TPA1P40032 644 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W PSF2P40359 213 aa3.25□□□□□ -1.89
SWD3YBR175W RPS0BP46654 252 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W CTF18P49956 741 aa3.25□□□□□ -1.89
SWD3YBR175W HFM1P51979 1187 aa3.25□□□□□ -1.89
SWD3YBR175W YGR016WP53209 190 aa3.25□□□□□ -1.89
SWD3YBR175W BRE5P53741 515 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W GPD1Q00055 391 aaKnown RBP3.25□□□□□ -1.89
SWD3YBR175W YKR011CQ02209 353 aa3.25□□□□□ -1.89
SWD3YBR175W TIM50Q02776 476 aa3.25□□□□□ -1.89
SWD3YBR175W DUS4Q06063 367 aa3.25□□□□□ -1.89
SWD3YBR175W YLR407WQ06070 228 aa3.25□□□□□ -1.89
SWD3YBR175W YCG1Q06680 1035 aa3.25□□□□□ -1.89
SWD3YBR175W VHS3Q08438 674 aa3.25□□□□□ -1.89
SWD3YBR175W THI21Q08975 551 aa3.25□□□□□ -1.89
SWD3YBR175W HAL9Q12180 1030 aa3.25□□□□□ -1.89
SWD3YBR175W OSW2Q12202 724 aa3.25□□□□□ -1.89
SWD3YBR175W NAT1P12945 854 aaKnown RBP3.24□□□□□ -1.89
SWD3YBR175W POL3P15436 1097 aa3.24□□□□□ -1.89
SWD3YBR175W TPM1P17536 199 aaKnown RBP3.24□□□□□ -1.89
SWD3YBR175W CLB4P24871 460 aa3.24□□□□□ -1.89
SWD3YBR175W DGR2P32330 852 aa3.24□□□□□ -1.89
SWD3YBR175W RPD3P32561 433 aa3.24□□□□□ -1.89
SWD3YBR175W TYE7P33122 291 aaPredicted RBP3.24□□□□□ -1.89
SWD3YBR175W TAF5P38129 798 aa3.24□□□□□ -1.89
SWD3YBR175W YBR138CP38277 524 aa3.24□□□□□ -1.89
SWD3YBR175W UME6P39001 836 aa3.24□□□□□ -1.89
SWD3YBR175W CAJ1P39101 391 aa3.24□□□□□ -1.89
SWD3YBR175W LYS14P40971 790 aa3.24□□□□□ -1.89
SWD3YBR175W PUS2P53167 370 aa3.24□□□□□ -1.89
SWD3YBR175W PLB2Q03674 706 aa3.24□□□□□ -1.89
SWD3YBR175W MFB1Q04922 465 aa3.24□□□□□ -1.89
SWD3YBR175W CSR1Q06705 408 aaKnown RBP3.24□□□□□ -1.89
SWD3YBR175W RXT3Q07458 294 aa3.24□□□□□ -1.89
SWD3YBR175W XYL2Q07993 356 aa3.24□□□□□ -1.89
SWD3YBR175W RTK1Q12100 620 aaPredicted RBP3.24□□□□□ -1.89
SWD3YBR175W RVB2Q12464 471 aaKnown RBP3.24□□□□□ -1.89
SWD3YBR175W CYB2P00175 591 aa3.23□□□□□ -1.89
SWD3YBR175W RPP2AP05319 106 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W FUM1P08417 488 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W CDC6P09119 513 aa3.23□□□□□ -1.89
SWD3YBR175W MIS1P09440 975 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W RED1P14291 827 aa3.23□□□□□ -1.89
SWD3YBR175W SIR1P21691 654 aa3.23□□□□□ -1.89
SWD3YBR175W RPC53P25441 422 aa3.23□□□□□ -1.89
SWD3YBR175W CTS1P29029 562 aa3.23□□□□□ -1.89
SWD3YBR175W MF(ALPHA)2P32435 120 aa3.23□□□□□ -1.89
SWD3YBR175W CBF2P32504 956 aa3.23□□□□□ -1.89
SWD3YBR175W NPL6P32832 435 aa3.23□□□□□ -1.89
SWD3YBR175W BYE1P36106 594 aa3.23□□□□□ -1.89
SWD3YBR175W SET3P36124 751 aa3.23□□□□□ -1.89
SWD3YBR175W AKL1P38080 1108 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W ECM21P38167 1117 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W PES4P39684 611 aa3.23□□□□□ -1.89
SWD3YBR175W SSP120P39931 234 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W AXL1P40851 1208 aa3.23□□□□□ -1.89
SWD3YBR175W MAD2P40958 196 aa3.23□□□□□ -1.89
SWD3YBR175W RMD8P43620 662 aa3.23□□□□□ -1.89
SWD3YBR175W ENP2P48234 707 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W YML6P51998 286 aa3.23□□□□□ -1.89
SWD3YBR175W RAI1P53063 387 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W DUS1P53759 423 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W LEE1Q02799 301 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W YMR210WQ03649 449 aa3.23□□□□□ -1.89
SWD3YBR175W ROT1Q03691 256 aa3.23□□□□□ -1.89
SWD3YBR175W SNO4Q04902 237 aa3.23□□□□□ -1.89
SWD3YBR175W UTP21Q06078 939 aaPredicted RBP3.23□□□□□ -1.89
SWD3YBR175W IWR1Q07532 353 aaPredicted RBP3.23□□□□□ -1.89
SWD3YBR175W HSP33Q08914 237 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W HSP32Q08992 237 aa3.23□□□□□ -1.89
SWD3YBR175W DBP10Q12389 995 aaKnown RBP3.23□□□□□ -1.89
SWD3YBR175W SMC6Q12749 1114 aa3.23□□□□□ -1.89
SWD3YBR175W PFK2P16862 959 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SWD3YBR175W ACO1P19414 778 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SWD3YBR175W BET2P20133 325 aa3.22□□□□□ -1.89
SWD3YBR175W OLE1P21147 510 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W SWI4P25302 1093 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W SGF29P25554 259 aa3.22□□□□□ -1.89
SWD3YBR175W KRR1P25586 316 aaPredicted RBP3.22□□□□□ -1.89
SWD3YBR175W IMG2P25642 146 aaPredicted RBP3.22□□□□□ -1.89
SWD3YBR175W DBF4P32325 704 aa3.22□□□□□ -1.89
SWD3YBR175W MTH1P35198 433 aa3.22□□□□□ -1.89
SWD3YBR175W TEF4P36008 412 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W MRPL36P36531 177 aa3.22□□□□□ -1.89
SWD3YBR175W YBR225WP38321 900 aa3.22□□□□□ -1.89
SWD3YBR175W NPR3P38742 1146 aa3.22□□□□□ -1.89
SWD3YBR175W YLF2P38746 405 aa3.22□□□□□ -1.89
SWD3YBR175W LRP1P38801 184 aaKnown RBP3.22□□□□□ -1.89
SWD3YBR175W KHA1P40309 873 aa3.22□□□□□ -1.89
SWD3YBR175W MND2P40577 368 aa3.22□□□□□ -1.89
SWD3YBR175W CIR1P42940 261 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms