RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SDS3P40505 327 aa2.41□□□□□ -2.02
NUP170YBL079W NUP85P46673 744 aa2.41□□□□□ -2.02
NUP170YBL079W SIP4P46954 829 aa2.41□□□□□ -2.02
NUP170YBL079W SPC105P53148 917 aa2.41□□□□□ -2.02
NUP170YBL079W YNR063WP53749 607 aa2.41□□□□□ -2.02
NUP170YBL079W AIM33Q04516 312 aa2.41□□□□□ -2.02
NUP170YBL079W YLR456WQ06199 204 aa2.41□□□□□ -2.02
NUP170YBL079W THI73Q07904 523 aa2.41□□□□□ -2.02
NUP170YBL079W HMI1Q12039 706 aa2.41□□□□□ -2.02
NUP170YBL079W LAG2Q92325 660 aa2.41□□□□□ -2.02
NUP170YBL079W CAN1P04817 590 aa2.41□□□□□ -2.02
NUP170YBL079W MST1P07236 462 aa2.41□□□□□ -2.02
NUP170YBL079W CHS2P14180 963 aa2.41□□□□□ -2.02
NUP170YBL079W NAM7P30771 971 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W ISF1P32488 338 aa2.41□□□□□ -2.02
NUP170YBL079W WBP1P33767 430 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W YKL100CP34248 587 aa2.41□□□□□ -2.02
NUP170YBL079W MIA40P36046 403 aa2.41□□□□□ -2.02
NUP170YBL079W SRX1P36077 127 aa2.41□□□□□ -2.02
NUP170YBL079W KAP104P38217 918 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W GIC1P38785 314 aa2.41□□□□□ -2.02
NUP170YBL079W RPH1P39956 796 aa2.41□□□□□ -2.02
NUP170YBL079W YIR016WP40572 265 aa2.41□□□□□ -2.02
NUP170YBL079W MAF1P41910 395 aa2.41□□□□□ -2.02
NUP170YBL079W YLR407WQ06070 228 aa2.41□□□□□ -2.02
NUP170YBL079W CDA1Q06702 301 aa2.41□□□□□ -2.02
NUP170YBL079W GPR1Q12361 961 aa2.41□□□□□ -2.02
NUP170YBL079W MYO1P08964 1928 aa2.41□□□□□ -2.02
NUP170YBL079W RPS14AP06367 137 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W YKR104WP0CE69 306 aa2.41□□□□□ -2.02
NUP170YBL079W SPT15P13393 240 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W LRE1P25579 583 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W RAM2P29703 316 aa2.41□□□□□ -2.02
NUP170YBL079W NTR2P36118 322 aaPredicted RBP2.41□□□□□ -2.02
NUP170YBL079W EXO5P38289 585 aa2.41□□□□□ -2.02
NUP170YBL079W LAM1P38851 1228 aa2.41□□□□□ -2.02
NUP170YBL079W LYS9P38999 446 aa2.41□□□□□ -2.02
NUP170YBL079W RPS14BP39516 138 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W DHH1P39517 506 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W DSE1P40077 573 aa2.41□□□□□ -2.02
NUP170YBL079W UBP7P40453 1071 aa2.41□□□□□ -2.02
NUP170YBL079W RPS0BP46654 252 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W TCB2P48231 1178 aa2.41□□□□□ -2.02
NUP170YBL079W YGR273CP53329 174 aa2.41□□□□□ -2.02
NUP170YBL079W SLG1P54867 378 aa2.41□□□□□ -2.02
NUP170YBL079W PML39Q03760 334 aa2.41□□□□□ -2.02
NUP170YBL079W GIS4Q04233 774 aa2.41□□□□□ -2.02
NUP170YBL079W ATG38Q05789 226 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W KAP95Q06142 861 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
NUP170YBL079W TLG2Q08144 397 aa2.41□□□□□ -2.02
NUP170YBL079W TCO89Q08921 799 aa2.41□□□□□ -2.02
NUP170YBL079W SEY1Q99287 776 aa2.41□□□□□ -2.02
NUP170YBL079W UBR2Q07963 1872 aa2.41□□□□□ -2.02
NUP170YBL079W HOM3P10869 527 aa2.41□□□□□ -2.02
NUP170YBL079W HEM12P32347 362 aaPredicted RBP2.41□□□□□ -2.02
NUP170YBL079W SRP72P38688 640 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W ORC6P38826 435 aa2.41□□□□□ -2.02
NUP170YBL079W DSS1P39112 969 aa2.41□□□□□ -2.02
NUP170YBL079W YAL037WP39728 267 aa2.41□□□□□ -2.02
NUP170YBL079W BIR1P47134 954 aa2.41□□□□□ -2.02
NUP170YBL079W PAN2P53010 1115 aaPredicted RBP2.41□□□□□ -2.02
NUP170YBL079W HOS2P53096 452 aaPredicted RBP2.41□□□□□ -2.02
NUP170YBL079W CPR6P53691 371 aaKnown RBP2.41□□□□□ -2.02
NUP170YBL079W TOF1P53840 1238 aa2.41□□□□□ -2.02
NUP170YBL079W ESBP6P53918 673 aa2.41□□□□□ -2.02
NUP170YBL079W VPS9P54787 451 aa2.41□□□□□ -2.02
NUP170YBL079W MET14Q02196 202 aa2.41□□□□□ -2.02
NUP170YBL079W ARO80Q04052 950 aa2.41□□□□□ -2.02
NUP170YBL079W YPR114WQ06107 315 aa2.41□□□□□ -2.02
NUP170YBL079W SUE1Q06524 206 aa2.41□□□□□ -2.02
NUP170YBL079W YLR030WQ07967 263 aa2.41□□□□□ -2.02
NUP170YBL079W TFB4Q12004 338 aa2.41□□□□□ -2.02
NUP170YBL079W CTF3Q12748 733 aa2.41□□□□□ -2.02
NUP170YBL079W HSP82P02829 709 aaKnown RBP2.4□□□□□ -2.02
NUP170YBL079W CDC26P14724 124 aa2.4□□□□□ -2.02
NUP170YBL079W PHO84P25297 587 aaKnown RBP2.4□□□□□ -2.02
NUP170YBL079W CWH43P25618 953 aa2.4□□□□□ -2.02
NUP170YBL079W HIR1P32479 840 aa2.4□□□□□ -2.02
NUP170YBL079W FRE1P32791 686 aa2.4□□□□□ -2.02
NUP170YBL079W TCD2P36101 447 aaKnown RBP2.4□□□□□ -2.02
NUP170YBL079W TEL2P53038 688 aa2.4□□□□□ -2.02
NUP170YBL079W TDA7P53882 636 aaPredicted RBP2.4□□□□□ -2.02
NUP170YBL079W RSC4Q02206 625 aa2.4□□□□□ -2.02
NUP170YBL079W ECM23Q02710 187 aa2.4□□□□□ -2.02
NUP170YBL079W YMR018WQ04364 514 aa2.4□□□□□ -2.02
NUP170YBL079W ECM38Q05902 660 aaPredicted RBP2.4□□□□□ -2.02
NUP170YBL079W ECM22Q05958 814 aaPredicted RBP2.4□□□□□ -2.02
NUP170YBL079W LSP1Q12230 341 aaKnown RBP2.4□□□□□ -2.02
NUP170YBL079W MOT1P32333 1867 aa2.4□□□□□ -2.03
NUP170YBL079W CCP1P00431 361 aa2.4□□□□□ -2.03
NUP170YBL079W RGP1P16664 663 aa2.4□□□□□ -2.03
NUP170YBL079W CLB1P24868 471 aa2.4□□□□□ -2.03
NUP170YBL079W LDB16P25587 256 aa2.4□□□□□ -2.03
NUP170YBL079W YPT52P36018 234 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W YBR225WP38321 900 aa2.4□□□□□ -2.03
NUP170YBL079W MED6P38782 295 aa2.4□□□□□ -2.03
NUP170YBL079W YIL067CP40514 678 aa2.4□□□□□ -2.03
NUP170YBL079W ALA1P40825 983 aaKnown RBP2.4□□□□□ -2.03
NUP170YBL079W HSH155P49955 971 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms