RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 SPATA32Q96LK8 384 aa21.01■□□□□ 0.95
PHGDH-226ENST00000641756 SETDB2Q96T68 719 aa21.01■□□□□ 0.95
PHGDH-226ENST00000641756 EPB41L4AQ9HCS5 686 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-226ENST00000641756 TRIM44Q96DX7 344 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-226ENST00000641756 PPP1R9BQ96SB3 815 aa21.01■□□□□ 0.95
PHGDH-226ENST00000641756 BSDC1Q9NW68 430 aaPredicted RBP21.01■□□□□ 0.95
PHGDH-226ENST00000641756 GOLGA8BA8MQT2 603 aa21■□□□□ 0.95
PHGDH-226ENST00000641756 CYB5R4Q7L1T6 521 aa21■□□□□ 0.95
PHGDH-226ENST00000641756 NBPF5PQ86XG9 351 aaPredicted RBP21■□□□□ 0.95
PHGDH-226ENST00000641756 LRP2BPQ9P2M1 347 aa21■□□□□ 0.95
PHGDH-226ENST00000641756 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
PHGDH-226ENST00000641756 ELP1O95163 1332 aa21■□□□□ 0.95
PHGDH-226ENST00000641756 A0A1B0GUL6 1792 aa21■□□□□ 0.95
PHGDH-226ENST00000641756 PATL2C9JE40 543 aaKnown RBP20.99■□□□□ 0.95
PHGDH-226ENST00000641756 PRKAB2O43741 272 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 GUCY1B3Q02153 619 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 SLC10A5Q5PT55 438 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 IFNL3Q8IZI9 196 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 LEO1Q8WVC0 666 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-226ENST00000641756 GJD4Q96KN9 370 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-226ENST00000641756 SCAND2PQ9GZW5 306 aaPredicted RBP20.99■□□□□ 0.95
PHGDH-226ENST00000641756 INCENPQ9NQS7 918 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 MINPP1Q9UNW1 487 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 HPS5Q9UPZ3 1129 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 LCORLQ8N3X6 602 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 KIF3AQ9Y496 699 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 NEDD4P46934 1319 aa20.99■□□□□ 0.95
PHGDH-226ENST00000641756 B4E1Z4 1266 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 FDPSP14324 419 aaKnown RBP20.98■□□□□ 0.95
PHGDH-226ENST00000641756 NAA16Q6N069 864 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-226ENST00000641756 MIGA1Q8NAN2 632 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 ARHGEF1Q92888 912 aaKnown RBP20.98■□□□□ 0.95
PHGDH-226ENST00000641756 NYXQ9GZU5 481 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 NAPBQ9H115 298 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 ZSCAN16Q9H4T2 348 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-226ENST00000641756 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 CTDSPL2Q05D32 466 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 GIMAP6Q6P9H5 292 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 ABCF2Q9UG63 623 aa20.98■□□□□ 0.95
PHGDH-226ENST00000641756 RGL2O15211 777 aa20.97■□□□□ 0.95
PHGDH-226ENST00000641756 UBE4AQ14139 1066 aa20.97■□□□□ 0.95
PHGDH-226ENST00000641756 ALX1Q15699 326 aa20.97■□□□□ 0.95
PHGDH-226ENST00000641756 NLRP3Q96P20 1036 aa20.97■□□□□ 0.95
PHGDH-226ENST00000641756 WDR19Q8NEZ3 1342 aa20.97■□□□□ 0.95
PHGDH-226ENST00000641756 GSG1L2A8MUP6 293 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 LETM1O95202 739 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-226ENST00000641756 LIG1P18858 919 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 SLC4A4Q9Y6R1 1079 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 ZNF804BA4D1E1 1349 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 COL1A1P02452 1464 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-226ENST00000641756 AFF2P51816 1311 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 CEBPZQ03701 1054 aaKnown RBP20.96■□□□□ 0.95
PHGDH-226ENST00000641756 CHMP4CQ96CF2 233 aa20.96■□□□□ 0.95
PHGDH-226ENST00000641756 COL24A1Q17RW2 1714 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 GOLGA6L4A6NEF3 574 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 CYP7A1P22680 504 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 ADGRA1Q86SQ6 560 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 SENP2Q9HC62 589 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 GNL3LQ9NVN8 582 aaKnown RBP20.95■□□□□ 0.94
PHGDH-226ENST00000641756 ANGEL1Q9UNK9 670 aaKnown RBP20.95■□□□□ 0.94
PHGDH-226ENST00000641756 TACC3Q9Y6A5 838 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 ZMYM6O95789 1325 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 TAF1LQ8IZX4 1826 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 SH2B2O14492 632 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-226ENST00000641756 KLRK1P26718 216 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 VPS37DQ86XT2 251 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 RAI14Q9P0K7 980 aa20.95■□□□□ 0.94
PHGDH-226ENST00000641756 TDO2P48775 406 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 RPS8P62241 208 aaKnown RBP20.94■□□□□ 0.94
PHGDH-226ENST00000641756 CAVIN4Q5BKX8 364 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 OTUD7BQ6GQQ9 843 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 TPTE2Q6XPS3 522 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 PGBD1Q96JS3 809 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 FTOQ9C0B1 505 aaKnown RBP eCLIP20.94■□□□□ 0.94
PHGDH-226ENST00000641756 LY75O60449 1722 aa20.94■□□□□ 0.94
PHGDH-226ENST00000641756 CPLX1O14810 134 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 RXRAP19793 462 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 ADD1P35611 737 aaKnown RBP20.93■□□□□ 0.94
PHGDH-226ENST00000641756 STK11IPQ8N1F8 1099 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 FAM84BQ96KN1 310 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-226ENST00000641756 MYH15Q9Y2K3 1946 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 SBF2Q86WG5 1849 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 PNPLA7Q6ZV29 1317 aa20.93■□□□□ 0.94
PHGDH-226ENST00000641756 DHX16O60231 1041 aaKnown RBP20.93■□□□□ 0.94
PHGDH-226ENST00000641756 ORC3Q9UBD5 711 aaPredicted RBP20.93■□□□□ 0.94
PHGDH-226ENST00000641756 NPHP1O15259 732 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 GNAT2P19087 354 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 HSPA1LP34931 641 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 RFC4P35249 363 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 SEPT12Q8IYM1 358 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 CFAP45Q9UL16 551 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 C4AP0C0L4 1744 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 KDM4AO75164 1064 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 CAMK4Q16566 473 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 FAM196AQ6ZSG2 479 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 BICD2Q8TD16 824 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 PDLIM2Q96JY6 352 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 NACAP1Q9BZK3 213 aa20.92■□□□□ 0.94
PHGDH-226ENST00000641756 CHD4Q14839 1912 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms