RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 TPM4P67936 248 aa23.36■■□□□ 1.33
SYNGAP1-227ENST00000638142 CCDC150Q8NCX0 1101 aa23.36■■□□□ 1.33
SYNGAP1-227ENST00000638142 ADORA1P30542 326 aa23.36■■□□□ 1.33
SYNGAP1-227ENST00000638142 ANTXR2P58335 489 aa23.36■■□□□ 1.33
SYNGAP1-227ENST00000638142 FBXW7Q969H0 707 aa23.36■■□□□ 1.33
SYNGAP1-227ENST00000638142 PAPPAQ13219 1627 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 NLRP12P59046 1061 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 ANO1Q5XXA6 986 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 KIF18AQ8NI77 898 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 ZCRB1Q8TBF4 217 aaKnown RBP23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 ZNF202O95125 648 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 CMA1P23946 247 aa23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 KIF23Q02241 960 aaPredicted RBP23.35■■□□□ 1.33
SYNGAP1-227ENST00000638142 ZNF213O14771 459 aa23.34■■□□□ 1.33
SYNGAP1-227ENST00000638142 KCNJ6P48051 423 aa23.34■■□□□ 1.33
SYNGAP1-227ENST00000638142 AXDND1Q5T1B0 1012 aaPredicted RBP23.34■■□□□ 1.33
SYNGAP1-227ENST00000638142 PUS7LQ9H0K6 701 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-227ENST00000638142 TRMT1Q9NXH9 659 aaKnown RBP23.34■■□□□ 1.33
SYNGAP1-227ENST00000638142 NAA30Q147X3 362 aaPredicted RBP23.33■■□□□ 1.33
SYNGAP1-227ENST00000638142 XPO4Q9C0E2 1151 aaKnown RBP23.33■■□□□ 1.33
SYNGAP1-227ENST00000638142 DDX41Q9UJV9 622 aaKnown RBP23.33■■□□□ 1.33
SYNGAP1-227ENST00000638142 ZAP70P43403 619 aa23.33■■□□□ 1.32
SYNGAP1-227ENST00000638142 TCIRG1Q13488 830 aa23.33■■□□□ 1.32
SYNGAP1-227ENST00000638142 SCARF1Q14162 830 aa23.33■■□□□ 1.32
SYNGAP1-227ENST00000638142 ERO1AQ96HE7 468 aa23.33■■□□□ 1.32
SYNGAP1-227ENST00000638142 KIF28PB7ZC32 967 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 GPAA1O43292 621 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 SMC2O95347 1197 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 TRIM28Q13263 835 aaKnown RBP23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 TIGD1Q96MW7 591 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 PLA2G12BQ9BX93 195 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 IFNKQ9P0W0 207 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 ZNF215Q9UL58 517 aaPredicted RBP23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 TNS2Q63HR2 1409 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 PFKFB1P16118 471 aa23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 NKX1-1Q15270 411 aaPredicted RBP23.32■■□□□ 1.32
SYNGAP1-227ENST00000638142 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 C4BP0C0L5 1744 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 NRDCO43847 1150 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 SLC39A14Q15043 492 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.31■■□□□ 1.328e-7■■■■□ 24.3
SYNGAP1-227ENST00000638142 MYH7P12883 1935 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 PSDA5PKW4 1024 aaPredicted RBP23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 IKBKBO14920 756 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 TAF7LQ5H9L4 462 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 TMC6Q7Z403 805 aa23.31■■□□□ 1.32
SYNGAP1-227ENST00000638142 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 PCCAP05165 728 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 SFPQP23246 707 aaKnown RBP eCLIP23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 GABPB1Q06547 395 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 TRDNQ13061 729 aa23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 NCAPHQ15003 741 aa23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 ZNF397Q8NF99 534 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 MORC2Q9Y6X9 1032 aaPredicted RBP23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 WDR17Q8IZU2 1322 aa23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 GJB4Q9NTQ9 266 aa23.3■■□□□ 1.32
SYNGAP1-227ENST00000638142 CDKL5O76039 1030 aa23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 CSF1RP07333 972 aa23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 IFIT5Q13325 482 aaKnown RBP23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 E4F1Q66K89 784 aaPredicted RBP23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 ARMCX5Q6P1M9 558 aa23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 ANGEL1Q9UNK9 670 aaKnown RBP23.29■■□□□ 1.32
SYNGAP1-227ENST00000638142 BIN1O00499 593 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 SLU7O95391 586 aaKnown RBP23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 TUBB4AP04350 444 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 RAB11FIP4Q86YS3 637 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 JMYQ8N9B5 988 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 HSP90AB3PQ58FF7 597 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 MROH7-TTC4A0A0A0MT08 1334 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 ATRNO75882 1429 aa23.28■■□□□ 1.32
SYNGAP1-227ENST00000638142 PPP6R2O75170 966 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 WDHD1O75717 1129 aaPredicted RBP23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 TUBE1Q9UJT0 475 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 SYKP43405 635 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 PPP1R13BQ96KQ4 1090 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 ALG1Q9BT22 464 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 RIC1Q4ADV7 1423 aa23.27■■□□□ 1.32
SYNGAP1-227ENST00000638142 ADD2P35612 726 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 METAP2P50579 478 aaKnown RBP eCLIP23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 CPLX2Q6PUV4 134 aaKnown RBP23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 TOM1L2Q6ZVM7 507 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 ZBTB38Q8NAP3 1195 aaPredicted RBP23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 HPSEQ9Y251 543 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 PI16Q6UXB8 463 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 VPS37DQ86XT2 251 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 ZNF512BQ96KM6 892 aaPredicted RBP23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 NBPF3Q9H094 633 aa23.26■■□□□ 1.31
SYNGAP1-227ENST00000638142 FAM237AA0A1B0GTK4 181 aa23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 FANCCQ00597 558 aa23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 L2HGDHQ9H9P8 463 aa23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 SH2B2O14492 632 aaPredicted RBP23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 MARCKSP29966 332 aaPredicted RBP23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 MCAMP43121 646 aa23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 TTF1Q15361 905 aaPredicted RBP23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
SYNGAP1-227ENST00000638142 METTL24Q5JXM2 366 aa23.24■■□□□ 1.31
SYNGAP1-227ENST00000638142 KMT5BQ4FZB7 885 aa23.24■■□□□ 1.31
SYNGAP1-227ENST00000638142 KRT40Q6A162 431 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms