RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SMIM5Q71RC9 77 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 NKX2-3Q8TAU0 364 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 DACT1Q9NYF0 836 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 CNTNAP4Q9C0A0 1308 aa25.22■■□□□ 1.63
CLN6-224ENST00000638076 CEBPZQ03701 1054 aaKnown RBP25.22■■□□□ 1.63
CLN6-224ENST00000638076 CAMK4Q16566 473 aa25.22■■□□□ 1.63
CLN6-224ENST00000638076 CYB5R4Q7L1T6 521 aa25.22■■□□□ 1.63
CLN6-224ENST00000638076 DOCK2Q92608 1830 aa25.22■■□□□ 1.63
CLN6-224ENST00000638076 ALX1Q15699 326 aa25.21■■□□□ 1.63
CLN6-224ENST00000638076 ANKRD18AQ8IVF6 992 aa25.21■■□□□ 1.63
CLN6-224ENST00000638076 BICD2Q8TD16 824 aa25.21■■□□□ 1.63
CLN6-224ENST00000638076 ARMT1Q9H993 441 aa25.21■■□□□ 1.63
CLN6-224ENST00000638076 EPB41L4AQ9HCS5 686 aaPredicted RBP25.21■■□□□ 1.63
CLN6-224ENST00000638076 ANGEL1Q9UNK9 670 aaKnown RBP25.21■■□□□ 1.63
CLN6-224ENST00000638076 SF3B3Q15393 1217 aaKnown RBP25.2■■□□□ 1.63
CLN6-224ENST00000638076 MAP3K11Q16584 847 aa25.2■■□□□ 1.63
CLN6-224ENST00000638076 IFNL3Q8IZI9 196 aa25.2■■□□□ 1.63
CLN6-224ENST00000638076 B4E1Z4 1266 aa25.2■■□□□ 1.62
CLN6-224ENST00000638076 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
CLN6-224ENST00000638076 NAPBQ9H115 298 aa25.2■■□□□ 1.62
CLN6-224ENST00000638076 ZMYM6O95789 1325 aa25.2■■□□□ 1.62
CLN6-224ENST00000638076 CPLX1O14810 134 aa25.19■■□□□ 1.62
CLN6-224ENST00000638076 CCDC192P0DO97 292 aa25.19■■□□□ 1.62
CLN6-224ENST00000638076 FTOQ9C0B1 505 aaKnown RBP eCLIP25.19■■□□□ 1.62
CLN6-224ENST00000638076 DDX19AQ9NUU7 478 aaKnown RBP25.19■■□□□ 1.62
CLN6-224ENST00000638076 NEDD4P46934 1319 aa25.19■■□□□ 1.62
CLN6-224ENST00000638076 GTF2E1P29083 439 aaPredicted RBP25.19■■□□□ 1.62
CLN6-224ENST00000638076 TNMDQ9H2S6 317 aa25.19■■□□□ 1.62
CLN6-224ENST00000638076 LRP2BPQ9P2M1 347 aa25.19■■□□□ 1.62
CLN6-224ENST00000638076 IQSEC3Q9UPP2 1182 aaPredicted RBP25.19■■□□□ 1.62
CLN6-224ENST00000638076 SH2B2O14492 632 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 NR1I2O75469 434 aa25.18■■□□□ 1.62
CLN6-224ENST00000638076 MSNP26038 577 aaKnown RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 ILDR1Q86SU0 546 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 BCL2L12Q9HB09 334 aa25.18■■□□□ 1.62
CLN6-224ENST00000638076 ORC3Q9UBD5 711 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 USP25Q9UHP3 1055 aa25.18■■□□□ 1.62
CLN6-224ENST00000638076 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 ZNF396Q96N95 335 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 USP28Q96RU2 1077 aa25.18■■□□□ 1.62
CLN6-224ENST00000638076 BSDC1Q9NW68 430 aaPredicted RBP25.18■■□□□ 1.62
CLN6-224ENST00000638076 RCOR1Q9UKL0 485 aa25.18■■□□□ 1.62
CLN6-224ENST00000638076 GSG1L2A8MUP6 293 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 PRKCSHP14314 528 aaPredicted RBP25.17■■□□□ 1.62
CLN6-224ENST00000638076 INCENPQ9NQS7 918 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 MYH15Q9Y2K3 1946 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 ATL3Q6DD88 541 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 OTUD7BQ6GQQ9 843 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 LCORLQ8N3X6 602 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 C8orf76Q96K31 380 aa25.17■■□□□ 1.62
CLN6-224ENST00000638076 NOL7Q9UMY1 257 aaKnown RBP25.17■■□□□ 1.62
CLN6-224ENST00000638076 WTIPA6NIX2 430 aaPredicted RBP25.16■■□□□ 1.62
CLN6-224ENST00000638076 PRKAB2O43741 272 aa25.16■■□□□ 1.62
CLN6-224ENST00000638076 GYG1P46976 350 aa25.16■■□□□ 1.62
CLN6-224ENST00000638076 CTDSPL2Q05D32 466 aa25.16■■□□□ 1.62
CLN6-224ENST00000638076 CLSTN2Q9H4D0 955 aa25.16■■□□□ 1.62
CLN6-224ENST00000638076 CCDC39Q9UFE4 941 aa25.16■■□□□ 1.62
CLN6-224ENST00000638076 CKAP2LQ8IYA6 745 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 TMEM87BQ96K49 555 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 NARFQ9UHQ1 456 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 ZNF804BA4D1E1 1349 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 PNPLA7Q6ZV29 1317 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 RGL2O15211 777 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 UBE4AQ14139 1066 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 RC3H1Q5TC82 1133 aaKnown RBP25.15■■□□□ 1.62
CLN6-224ENST00000638076 MIGA1Q8NAN2 632 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 SENP2Q9HC62 589 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 SRP68Q9UHB9 627 aaKnown RBP25.15■■□□□ 1.62
CLN6-224ENST00000638076 USP21Q9UK80 565 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 SLC4A4Q9Y6R1 1079 aa25.15■■□□□ 1.62
CLN6-224ENST00000638076 RPS6KA4O75676 772 aa25.14■■□□□ 1.62
CLN6-224ENST00000638076 GNAT2P19087 354 aa25.14■■□□□ 1.62
CLN6-224ENST00000638076 METAP2P50579 478 aaKnown RBP eCLIP25.14■■□□□ 1.62
CLN6-224ENST00000638076 SLC10A5Q5PT55 438 aa25.14■■□□□ 1.62
CLN6-224ENST00000638076 IGDCC4Q8TDY8 1250 aa25.14■■□□□ 1.62
CLN6-224ENST00000638076 CELF1Q92879 486 aaKnown RBP25.14■■□□□ 1.62
CLN6-224ENST00000638076 MINPP1Q9UNW1 487 aa25.14■■□□□ 1.62
CLN6-224ENST00000638076 FAM182BQ5T319 152 aa25.14■■□□□ 1.61
CLN6-224ENST00000638076 FBXO18Q8NFZ0 1043 aa25.14■■□□□ 1.61
CLN6-224ENST00000638076 GNL3LQ9NVN8 582 aaKnown RBP25.14■■□□□ 1.61
CLN6-224ENST00000638076 SCN7AQ01118 1682 aa25.14■■□□□ 1.61
CLN6-224ENST00000638076 TAF1P21675 1872 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 TYRO3Q06418 890 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 APOA5Q6Q788 366 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 RBM43Q6ZSC3 357 aaKnown RBP25.13■■□□□ 1.61
CLN6-224ENST00000638076 NACAP1Q9BZK3 213 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.13■■□□□ 1.61
CLN6-224ENST00000638076 ABCF2Q9UG63 623 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 GNPATO15228 680 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 RXRAP19793 462 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 TDO2P48775 406 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 SETDB2Q96T68 719 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 TACC3Q9Y6A5 838 aa25.13■■□□□ 1.61
CLN6-224ENST00000638076 KDM4AO75164 1064 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 AKNAD1Q5T1N1 836 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 NYXQ9GZU5 481 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 LY9Q9HBG7 655 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 ZSWIM5Q9P217 1185 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 C4AP0C0L4 1744 aa25.12■■□□□ 1.61
CLN6-224ENST00000638076 C4BP0C0L5 1744 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms