RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 CNGA1P29973 690 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 PKP1Q13835 747 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 E2F7Q96AV8 911 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 PPRC1Q5VV67 1664 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 TPM3P06753 285 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 ERAP2Q6P179 960 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
CACNA1A-217ENST00000635786 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 SQSTM1Q13501 440 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 SYCP1Q15431 976 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 DRC7Q8IY82 874 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 VWDEQ8N2E2 1590 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 VPS37AQ8NEZ2 397 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 APPBP2Q92624 585 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 NEURL4Q96JN8 1562 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 ZIM2Q9NZV7 527 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 MYO3AQ8NEV4 1616 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 PPIP5K1Q6PFW1 1433 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 KIF3CO14782 793 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 SLF2Q8IX21 1173 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 USP26Q9BXU7 913 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 SH3BP1Q9Y3L3 701 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
CACNA1A-217ENST00000635786 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 SCP2P22307 547 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 PLPP7Q8NBV4 271 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 COPRSQ9NQ92 184 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 VPS72Q15906 364 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 Q3C1V9 767 aa12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 ZNF771Q7L3S4 317 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 V9GY48 417 aaPredicted RBP12.11□□□□□ -0.47
CACNA1A-217ENST00000635786 F6X3S4 739 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 GJA5P36382 358 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 DNAAF2Q9NVR5 837 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 DIP2CQ9Y2E4 1556 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 MAN1A1P33908 653 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 MTHFSP49914 203 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 INTS3Q68E01 1043 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 NSFL1CQ9UNZ2 370 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 KIF13AQ9H1H9 1805 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 PTPRTO14522 1441 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 HIP1RO75146 1068 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 SLC20A2Q08357 652 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 MEI1Q5TIA1 1274 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 MYO1HQ8N1T3 1032 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
CACNA1A-217ENST00000635786 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 PLCB3Q01970 1234 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 MCL1Q07820 350 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 GPRASP2Q96D09 838 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 HINFPQ9BQA5 517 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 TET3O43151 1660 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 GPSM2P81274 684 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 CRELD1Q96HD1 420 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 CGNQ9P2M7 1197 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 MYOM2P54296 1465 aa12.09□□□□□ -0.47
CACNA1A-217ENST00000635786 NSD2O96028 1365 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 ZRANB2O95218 330 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 U2AF2P26368 475 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 MCM2P49736 904 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 MTMR2Q13614 643 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 CASC1Q6TDU7 716 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 DDX42Q86XP3 938 aaKnown RBP eCLIP12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 TTC8Q8TAM2 541 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 KIAA1524Q8TCG1 905 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 ARHGAP45Q92619 1136 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 SLC45A1Q9Y2W3 748 aa12.08□□□□□ -0.48
CACNA1A-217ENST00000635786 C3orf80F5H4A9 247 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 PIP5K1CO60331 668 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 ADCY5O95622 1261 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 IL31Q6EBC2 164 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 KATNA1O75449 491 aa12.07□□□□□ -0.48
CACNA1A-217ENST00000635786 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
CACNA1A-217ENST00000635786 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms