RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 FAM205AQ6ZU69 1335 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 SH3TC1Q8TE82 1336 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 DOCK3Q8IZD9 2030 aa9.44□□□□□ -0.9
TCF4-266ENST00000628689 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
TCF4-266ENST00000628689 RPS8P62241 208 aaKnown RBP9.43□□□□□ -0.9
TCF4-266ENST00000628689 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
TCF4-266ENST00000628689 PRKCZQ05513 592 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 SLAIN1Q8ND83 568 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 ZNF428Q96B54 188 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 PHACTR3Q96KR7 559 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 C1QTNF1Q9BXJ1 281 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 TTYH1Q9H313 450 aaPredicted RBP9.43□□□□□ -0.9
TCF4-266ENST00000628689 PANK3Q9H999 370 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
TCF4-266ENST00000628689 MIS18AQ9NYP9 233 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 CPA4Q9UI42 421 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 GGA1Q9UJY5 639 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 HCN4Q9Y3Q4 1203 aa9.43□□□□□ -0.9
TCF4-266ENST00000628689 COL1A1P02452 1464 aaPredicted RBP9.42□□□□□ -0.9
TCF4-266ENST00000628689 BTBD19C9JJ37 291 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 INHAP05111 366 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
TCF4-266ENST00000628689 MCM10Q7L590 875 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 ADAMTS19Q8TE59 1207 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 LRFN3Q9BTN0 628 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 ZCCHC17Q9NP64 241 aaKnown RBP9.42□□□□□ -0.9
TCF4-266ENST00000628689 ANKIB1Q9P2G1 1089 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 GABRQQ9UN88 632 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
TCF4-266ENST00000628689 TCF20Q9UGU0 1960 aaKnown RBP9.42□□□□□ -0.9
TCF4-266ENST00000628689 OTOFQ9HC10 1997 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 ADCY3O60266 1144 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 ELNP15502 786 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 MMP14P50281 582 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
TCF4-266ENST00000628689 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 PPP2R3BQ9Y5P8 575 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
TCF4-266ENST00000628689 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 ADGRA2Q96PE1 1338 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 DCTN1Q14203 1278 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 STRIP1Q5VSL9 837 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 KIAA0825Q8IV33 1275 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 UHRF1Q96T88 793 aaPredicted RBP9.4□□□□□ -0.9
TCF4-266ENST00000628689 P2RX7Q99572 595 aaKnown RBP9.4□□□□□ -0.9
TCF4-266ENST00000628689 PCDHAC2Q9Y5I4 1007 aa9.4□□□□□ -0.9
TCF4-266ENST00000628689 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 MGAMO43451 1857 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 CETPP11597 493 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 TAF7Q15545 349 aaPredicted RBP9.39□□□□□ -0.91
TCF4-266ENST00000628689 ATXN2LQ8WWM7 1075 aaKnown RBP9.39□□□□□ -0.91
TCF4-266ENST00000628689 BBXQ8WY36 941 aaPredicted RBP9.39□□□□□ -0.91
TCF4-266ENST00000628689 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 ASB2Q96Q27 587 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 C11orf49Q9H6J7 331 aa9.39□□□□□ -0.91
TCF4-266ENST00000628689 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 U2SURPO15042 1029 aaKnown RBP9.38□□□□□ -0.91
TCF4-266ENST00000628689 FLT3LGP49771 235 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 VGLL4Q14135 290 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 RASA3Q14644 834 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 PDIA6Q15084 440 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 DLGAP5Q15398 846 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 HSP90AB3PQ58FF7 597 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 EFCAB3Q8N7B9 438 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 PXYLP1Q8TE99 480 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 RTF1Q92541 710 aaKnown RBP9.38□□□□□ -0.91
TCF4-266ENST00000628689 SEC31BQ9NQW1 1179 aa9.38□□□□□ -0.91
TCF4-266ENST00000628689 AOX1Q06278 1338 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 MRE11P49959 708 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 FCGRTP55899 365 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
TCF4-266ENST00000628689 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 IER5LQ5T953 404 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 FAM89AQ96GI7 184 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 NECAB3Q96P71 396 aaPredicted RBP9.37□□□□□ -0.91
TCF4-266ENST00000628689 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.37□□□□□ -0.91
TCF4-266ENST00000628689 EPHX3Q9H6B9 360 aa9.37□□□□□ -0.91
TCF4-266ENST00000628689 DDX60LQ5H9U9 1706 aaKnown RBP9.36□□□□□ -0.91
TCF4-266ENST00000628689 PFASO15067 1338 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 IRF6O14896 467 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 ANXA1P04083 346 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 PROSER3Q2NL68 480 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 TTLL5Q6EMB2 1281 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.36□□□□□ -0.91
TCF4-266ENST00000628689 PRMT6Q96LA8 375 aaPredicted RBP9.36□□□□□ -0.91
TCF4-266ENST00000628689 VEZTQ9HBM0 779 aa9.36□□□□□ -0.91
TCF4-266ENST00000628689 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 XDHP47989 1333 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 BCRP11274 1271 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 SNAPC2Q13487 334 aa9.35□□□□□ -0.91
TCF4-266ENST00000628689 IRF5Q13568 498 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms