RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 RNF40O75150 1001 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 GADD45BO75293 160 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 RASSF9O75901 435 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 RNF8O76064 485 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PRPF6O94906 941 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 PENKP01210 267 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 SLC4A2P04920 1241 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 VIL1P09327 827 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ZFXP17010 805 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 CYP11B2P19099 503 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MCM3P25205 808 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PPP2R1AP30153 589 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 STIP1P31948 543 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 TXLNAP40222 546 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCT5P48643 541 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PSMD7P51665 324 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ETF1P62495 437 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ZBED6P86452 979 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TYRO3Q06418 890 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ACTN3Q08043 901 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 PPFIA1Q13136 1202 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MPP3Q13368 585 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SNX1Q13596 522 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 GNL2Q13823 731 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 KCNB1Q14721 858 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MYBPC3Q14896 1274 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 POSTNQ15063 836 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PKN1Q16512 942 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 KIAA0753Q2KHM9 967 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC144BQ3MJ40 725 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 Q4G0T1 1027 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC40Q4G0X9 1142 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC92Q53HC0 331 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 BEND6Q5SZJ8 279 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC181Q5TID7 509 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 VPS53Q5VIR6 699 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 DPY19L2Q6NUT2 758 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CYB5D1Q6P9G0 228 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CRELD2Q6UXH1 353 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 SYNE3Q6ZMZ3 975 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 BZW1Q7L1Q6 419 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 USP48Q86UV5 1035 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PARP9Q8IXQ6 854 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC144CPQ8IYA2 1237 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ELOA2Q8IYF1 753 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 DZIP1LQ8IYY4 767 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 SMYD1Q8NB12 490 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ATP11CQ8NB49 1132 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 FAM76AQ8TAV0 307 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 NECTIN2Q92692 538 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 P3H4Q92791 437 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SMARCC1Q92922 1105 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 KCNN1Q92952 543 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CUL5Q93034 780 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 BHMTQ93088 406 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CCDC102AQ96A19 550 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PPP1R14BQ96C90 147 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 IL17RAQ96F46 866 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ACSBG1Q96GR2 724 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 FAM81BQ96LP2 452 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 JAKMIP1Q96N16 626 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ANKRD27Q96NW4 1050 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CLIC6Q96NY7 704 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SPAG5Q96R06 1193 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TSC22D3Q99576 134 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.18□□□□□ -2.06
TCF4-264ENST00000628391 TRAIPQ9BWF2 469 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CARD6Q9BX69 1037 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PARD6BQ9BYG5 372 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 SRCIN1Q9C0H9 1055 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 OSBPL5Q9H0X9 879 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 ZWILCHQ9H900 591 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 EBF2Q9HAK2 575 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CBX8Q9HC52 389 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ZCCHC17Q9NP64 241 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 PAPOLBQ9NRJ5 636 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 KLC4Q9NSK0 619 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 DNAAF2Q9NVR5 837 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 TUBA8Q9NY65 449 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 RTEL1Q9NZ71 1219 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ANKIB1Q9P2G1 1089 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 CIDEBQ9UHD4 219 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 DDX20Q9UHI6 824 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 HOOK1Q9UJC3 728 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 GGA2Q9UJY4 613 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TMCO1Q9UM00 188 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 BARX2Q9UMQ3 279 aaPredicted RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 G3BP2Q9UN86 482 aaKnown RBP2.18□□□□□ -2.06
TCF4-264ENST00000628391 PHF24Q9UPV7 400 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TRPC6Q9Y210 931 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 MRFAP1Q9Y605 127 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 PIK3R4Q99570 1358 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 DISP3Q9P2K9 1392 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 ATP7BP35670 1465 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 UNC13BO14795 1591 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 GLI2P10070 1586 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 QRICH2Q9H0J4 1663 aa2.18□□□□□ -2.06
TCF4-264ENST00000628391 TTC21AQ8NDW8 1320 aa2.17□□□□□ -2.06
TCF4-264ENST00000628391 KDM6AO15550 1401 aaPredicted RBP2.17□□□□□ -2.06
TCF4-264ENST00000628391 ABCC6O95255 1503 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms