RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 HMGB1P1B2RPK0 211 aaPredicted RBP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 SAP30BPQ9UHR5 308 aaKnown RBP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 MTUS1Q9ULD2 1270 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 PRPF6O94906 941 aaKnown RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 DCPSQ96C86 337 aaKnown RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 NUF2Q9BZD4 464 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 NUCB1Q02818 461 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 DDX39AO00148 427 aaKnown RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 GNPATO15228 680 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 GNG11P61952 73 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 TMEM57Q8N5G2 664 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 ALG1Q9BT22 464 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 GJB2P29033 226 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 ITKQ08881 620 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 HSP90AA4PQ58FG1 418 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 DZIP3Q86Y13 1208 aaKnown RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 CSRNP2Q9H175 543 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 H7C1D1 291 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 PDE6AP16499 860 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 SYKP43405 635 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 CALCOCO2Q13137 446 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 ANKRD2Q9GZV1 360 aa13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 MTRF1LQ9UGC7 380 aaKnown RBP13.63□□□□□ -0.23
SLC6A6-210ENST00000622186 BRD4O60885 1362 aaPredicted RBP13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 MARCKSP29966 332 aaPredicted RBP13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 MAN1A1P33908 653 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 SLC12A2P55011 1212 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 TMCO5AQ8N6Q1 288 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 ZFP91Q96JP5 570 aaPredicted RBP13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 CSADQ9Y600 493 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 ERBINQ96RT1 1412 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 TLDC2A0PJX2 215 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 H0YIN7 160 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 SETDB1Q15047 1291 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 GPCPD1Q9NPB8 672 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 DKC1O60832 514 aaKnown RBP eCLIP13.62□□□□□ -0.237e-7■■■■□ 20.4
SLC6A6-210ENST00000622186 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 MIPOL1Q8TD10 442 aa13.62□□□□□ -0.23
SLC6A6-210ENST00000622186 EIF4E1BA6NMX2 242 aaKnown RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 CASC4Q6P4E1 433 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 SDCCAG8Q86SQ7 713 aaPredicted RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 ARPP19P56211 112 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 EXOC7Q9UPT5 735 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 PARP1P09874 1014 aaKnown RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 RFC1P35251 1148 aaPredicted RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 PDE6BP35913 854 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 KRT33BQ14525 404 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 ABI1Q8IZP0 508 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 RPL13P26373 211 aaKnown RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 MAEAQ7L5Y9 396 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 UFL1O94874 794 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 HSPA2P54652 639 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 FMNL3Q8IVF7 1028 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 PLIN2Q99541 437 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 PRDM5Q9NQX1 630 aaPredicted RBP13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 ECHDC1Q9NTX5 307 aa13.61□□□□□ -0.23
SLC6A6-210ENST00000622186 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 GNA11P29992 359 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 TMTC4Q5T4D3 741 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 GPR161Q8N6U8 529 aaKnown RBP13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 DHX58Q96C10 678 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 FTOQ9C0B1 505 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 MIGA1Q8NAN2 632 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 RTL9Q8NET4 1388 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 SPOPO43791 374 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 TBC1D12O60347 775 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 CPXCR1Q8N123 301 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 BICDL2A1A5D9 508 aa13.6□□□□□ -0.23
SLC6A6-210ENST00000622186 RBBP5Q15291 538 aaKnown RBP13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 NME9Q86XW9 330 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 NEMFO60524 1076 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 SLC9A5Q14940 896 aa13.59□□□□□ -0.23
SLC6A6-210ENST00000622186 ZNF449Q6P9G9 518 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms