RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 BCL9O00512 1426 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 ERVV-1B6SEH8 477 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 SH2B2O14492 632 aaPredicted RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 SPTLC2O15270 562 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 CTIFO43310 598 aaKnown RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 PDE8AO60658 829 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 ITGA6P23229 1130 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 RBM6P78332 1123 aaKnown RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 STK38Q15208 465 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 SYCP1Q15431 976 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 HLFQ16534 295 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 LDHAL6AQ6ZMR3 332 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 CACTINQ8WUQ7 758 aaKnown RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 AK7Q96M32 723 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 NAT10Q9H0A0 1025 aaKnown RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 GREM2Q9H772 168 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 PIH1D3Q9NQM4 214 aaKnown RBP11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 STRN4Q9NRL3 753 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 KCND1Q9NSA2 647 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 CLIC4Q9Y696 253 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 TIAM2Q8IVF5 1701 aa11.2□□□□□ -0.62
IGHV3-54-201ENST00000622166 WNK3Q9BYP7 1800 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 COL14A1Q05707 1796 aaKnown RBP11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 FAM237AA0A1B0GTK4 181 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 TCRBV5S4A2TA0A5A2 114 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 SMTNL1A8MU46 457 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 IRS4O14654 1257 aaPredicted RBP11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 RIOK3O14730 519 aaKnown RBP11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 PDE8BO95263 885 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 FGFR2P21802 821 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 CMA1P23946 247 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 LRMPQ12912 555 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCDC144BQ3MJ40 725 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 AXDND1Q5T1B0 1012 aaPredicted RBP11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 ANO1Q5XXA6 986 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 OTUD7BQ6GQQ9 843 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCDC144CPQ8IYA2 1237 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 TMEM87BQ96K49 555 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 TIGD1Q96MW7 591 aa11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
IGHV3-54-201ENST00000622166 NID2Q14112 1375 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 NEDD4P46934 1319 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 CHD4Q14839 1912 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 BECN2A8MW95 431 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 KIF28PB7ZC32 967 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 CPLX1O14810 134 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 CDKL5O76039 1030 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 PDE6AP16499 860 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 NDUFA8P51970 172 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 NLRP12P59046 1061 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 TRDNQ13061 729 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 DHX8Q14562 1220 aaKnown RBP11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 SF3A1Q15459 793 aaKnown RBP11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 PI16Q6UXB8 463 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 SYNE3Q6ZMZ3 975 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 CYB5R4Q7L1T6 521 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 LRRC8AQ8IWT6 810 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 SYNE4Q8N205 404 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 BCL2L12Q9HB09 334 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 CNNM1Q9NRU3 951 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 IMPACTQ9P2X3 320 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 TBC1D2BQ9UPU7 963 aa11.18□□□□□ -0.62
IGHV3-54-201ENST00000622166 RREB1Q92766 1687 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 MROH5Q6ZUA9 1318 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZNF532Q9HCE3 1301 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 A0A1B0GVL5 298 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 PPP6R2O75170 966 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 HSPA2P54652 639 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 GSDMDP57764 484 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 SLC9C2Q5TAH2 1124 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 CPLX2Q6PUV4 134 aaKnown RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 AOPEPQ8N6M6 819 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 IGDCC4Q8TDY8 1250 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 ANKRD7Q92527 254 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 LPIN2Q92539 896 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 STRBPQ96SI9 672 aaKnown RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 SDF4Q9BRK5 362 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 ALG1Q9BT22 464 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 CCDC94Q9BW85 323 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 OSBPL5Q9H0X9 879 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 PAXBP1Q9Y5B6 917 aa11.17□□□□□ -0.62
IGHV3-54-201ENST00000622166 LAMB2P55268 1798 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 BCORQ6W2J9 1755 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 ZNF202O95125 648 aa11.16□□□□□ -0.62
IGHV3-54-201ENST00000622166 POLR3DP05423 398 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms