RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 OTUD6BQ8N6M0 293 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 DDX17Q92841 729 aaKnown RBP11.88□□□□□ -0.51
COL25A1-209ENST00000622134 AS3MTQ9HBK9 375 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 CALML3P27482 149 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 ANO6Q4KMQ2 910 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 DHX37Q8IY37 1157 aaKnown RBP11.88□□□□□ -0.51
COL25A1-209ENST00000622134 MCM9Q9NXL9 1143 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 MYOM2P54296 1465 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 RPS8P62241 208 aaKnown RBP11.88□□□□□ -0.51
COL25A1-209ENST00000622134 ZSCAN26Q16670 478 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 TTC22Q5TAA0 569 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 HDXQ7Z353 690 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 AFF2P51816 1311 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 ATP7BP35670 1465 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 TRIM37O94972 964 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL25A1-209ENST00000622134 DNAJC21Q5F1R6 531 aaKnown RBP11.88□□□□□ -0.51
COL25A1-209ENST00000622134 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 PAG1Q9NWQ8 432 aa11.88□□□□□ -0.51
COL25A1-209ENST00000622134 LIG1P18858 919 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
COL25A1-209ENST00000622134 ZNF408Q9H9D4 720 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 ITGA6P23229 1130 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 BRINP3Q76B58 766 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 C8orf58Q8NAV2 365 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL25A1-209ENST00000622134 A6NNZ2 444 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 SMARCA5O60264 1052 aaPredicted RBP11.87□□□□□ -0.51
COL25A1-209ENST00000622134 IL6STP40189 918 aaPredicted RBP11.87□□□□□ -0.51
COL25A1-209ENST00000622134 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 SULF1Q8IWU6 871 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 ZNF710Q8N1W2 664 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 DCPSQ96C86 337 aaKnown RBP11.87□□□□□ -0.51
COL25A1-209ENST00000622134 USP16Q9Y5T5 823 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 RAD50Q92878 1312 aa11.87□□□□□ -0.51
COL25A1-209ENST00000622134 CTAGE15A4D2H0 777 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 OPA1O60313 960 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 CTAGE8P0CG41 777 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 CTAGE6Q86UF2 777 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 CTAGE4Q8IX94 777 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 LPIN2Q92539 896 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 SPATA31A3Q5VYP0 1347 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 SPDYE3A6NKU9 549 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 RNF113AO15541 343 aaKnown RBP11.86□□□□□ -0.51
COL25A1-209ENST00000622134 NEFHP12036 1026 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 TYRO3Q06418 890 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 PLS1Q14651 629 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 VAT1LQ9HCJ6 419 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 IQSEC3Q9UPP2 1182 aaPredicted RBP11.86□□□□□ -0.51
COL25A1-209ENST00000622134 METP08581 1390 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 PTPRTO14522 1441 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 DKC1O60832 514 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL25A1-209ENST00000622134 TTC37Q6PGP7 1564 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 VPS36Q86VN1 386 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 ZBTB43O43298 467 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 CARD14Q9BXL6 1004 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 LMBRD1Q9NUN5 540 aa11.86□□□□□ -0.51
COL25A1-209ENST00000622134 JARID2Q92833 1246 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 RRP36Q96EU6 259 aaKnown RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 GJB2P29033 226 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 UBA7P41226 1012 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 EAPPQ56P03 285 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 CCDC175P0C221 793 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 ZNF496Q96IT1 587 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 MEIS3Q99687 375 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 GPHNQ9NQX3 736 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 CNPY2Q9Y2B0 182 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 VAMP4O75379 141 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 GNA11P29992 359 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 PAFAH1B1P43034 410 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 SPECC1LQ69YQ0 1117 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 GIGYF2Q6Y7W6 1299 aaKnown RBP11.85□□□□□ -0.51
COL25A1-209ENST00000622134 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 GAS2L3Q86XJ1 694 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 ABCC3O15438 1527 aa11.85□□□□□ -0.51
COL25A1-209ENST00000622134 CHL1O00533 1208 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 TBCAO75347 108 aaKnown RBP11.84□□□□□ -0.51
COL25A1-209ENST00000622134 A1BGP04217 495 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 CKAP4Q07065 602 aaKnown RBP11.84□□□□□ -0.51
COL25A1-209ENST00000622134 RTN1Q16799 776 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 CEP57Q86XR8 500 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 ADGRL3Q9HAR2 1447 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 ADRA2BP18089 450 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 ELF2Q15723 593 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 CCDC50Q8IVM0 306 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 F13A1P00488 732 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 EIF5P55010 431 aaKnown RBP11.84□□□□□ -0.51
COL25A1-209ENST00000622134 FKBP15Q5T1M5 1219 aa11.84□□□□□ -0.51
COL25A1-209ENST00000622134 SYT10Q6XYQ8 523 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms