RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 PRC1O43663 620 aa22.73■■□□□ 1.23
LAPTM4B-204ENST00000619747 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
LAPTM4B-204ENST00000619747 NSUN7Q8NE18 718 aaKnown RBP22.73■■□□□ 1.23
LAPTM4B-204ENST00000619747 AIDAQ96BJ3 306 aa22.73■■□□□ 1.23
LAPTM4B-204ENST00000619747 GNPATO15228 680 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 UQCRFS1P1P0C7P4 283 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 KRT85P78386 507 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 RALYLQ86SE5 291 aaKnown RBP22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 LAMA4Q16363 1823 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 ZSCAN25Q6NSZ9 544 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 AK7Q96M32 723 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 GYG1P46976 350 aa22.72■■□□□ 1.23
LAPTM4B-204ENST00000619747 KDM4AO75164 1064 aa22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 MIGA1Q8NAN2 632 aa22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 ARMT1Q9H993 441 aa22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 ABCF2Q9UG63 623 aa22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 GIMAP6Q6P9H5 292 aa22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 ZNF512BQ96KM6 892 aaPredicted RBP22.71■■□□□ 1.23
LAPTM4B-204ENST00000619747 PHF14O94880 888 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 RXRAP19793 462 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 CDK11BP21127 795 aaKnown RBP22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 MCM5P33992 734 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 NBPF3Q9H094 633 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 TAF1P21675 1872 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 MBD4O95243 580 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 ANTXR2P58335 489 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 TBC1D10CQ8IV04 446 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 TSPY26PQ9H489 355 aa22.7■■□□□ 1.22
LAPTM4B-204ENST00000619747 KLF18A0A0U1RQI7 1052 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 PRKAB2O43741 272 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 UBE3CQ15386 1083 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 OTUD7BQ6GQQ9 843 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 TICAM2Q86XR7 235 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 NCOA7Q8NI08 942 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 CELF1Q92879 486 aaKnown RBP22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 BCL2L12Q9HB09 334 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 COL4A1P02462 1669 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 SPATA32Q96LK8 384 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 AGXT2Q9BYV1 514 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 FTOQ9C0B1 505 aaKnown RBP eCLIP22.69■■□□□ 1.222e-10■□□□□ 10.1
LAPTM4B-204ENST00000619747 LRP2BPQ9P2M1 347 aa22.69■■□□□ 1.22
LAPTM4B-204ENST00000619747 TCRBV5S4A2TA0A5A2 114 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 MAP3K12Q12852 859 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 CAMK4Q16566 473 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 SPEF2Q9C093 1822 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 B4E1Z4 1266 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 CCDC183Q5T5S1 534 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 ANKRD18AQ8IVF6 992 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 MB21D2Q8IYB1 491 aaPredicted RBP22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 STRBPQ96SI9 672 aaKnown RBP22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 GJB4Q9NTQ9 266 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 ABCC12Q96J65 1359 aa22.68■■□□□ 1.22
LAPTM4B-204ENST00000619747 MEX3CQ5U5Q3 659 aaKnown RBP22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 CLEC4GQ6UXB4 293 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 SMARCC2Q8TAQ2 1214 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 CDC5LQ99459 802 aaKnown RBP22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 CCDC39Q9UFE4 941 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 GOLGA8BA8MQT2 603 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 NPHP1O15259 732 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 CTDSPL2Q05D32 466 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 TRDNQ13061 729 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 GOLGA6L4A6NEF3 574 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 LIG1P18858 919 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 CCDC144CPQ8IYA2 1237 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 FNBP4Q8N3X1 1017 aaPredicted RBP22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 SENP2Q9HC62 589 aa22.67■■□□□ 1.22
LAPTM4B-204ENST00000619747 NWD2Q9ULI1 1742 aa22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 ZPR1O75312 459 aa22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 CYB5R4Q7L1T6 521 aa22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 NBPF5PQ86XG9 351 aaPredicted RBP22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 ZNF274Q96GC6 653 aaPredicted RBP22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
LAPTM4B-204ENST00000619747 TOMM22Q9NS69 142 aa22.65■■□□□ 1.22
LAPTM4B-204ENST00000619747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.65■■□□□ 1.22
LAPTM4B-204ENST00000619747 RESTQ13127 1097 aa22.65■■□□□ 1.22
LAPTM4B-204ENST00000619747 SLC51AQ86UW1 340 aa22.65■■□□□ 1.22
LAPTM4B-204ENST00000619747 LEO1Q8WVC0 666 aaPredicted RBP22.65■■□□□ 1.22
LAPTM4B-204ENST00000619747 VPS37DQ86XT2 251 aa22.64■■□□□ 1.22
LAPTM4B-204ENST00000619747 LCORLQ8N3X6 602 aa22.64■■□□□ 1.22
LAPTM4B-204ENST00000619747 NAPBQ9H115 298 aa22.64■■□□□ 1.22
LAPTM4B-204ENST00000619747 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.22
LAPTM4B-204ENST00000619747 MYH7P12883 1935 aa22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 FDPSP14324 419 aaKnown RBP22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 RRP12Q5JTH9 1297 aaKnown RBP22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 TAF3Q5VWG9 929 aa22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 ZNF771Q7L3S4 317 aaPredicted RBP22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 MPNDQ8N594 471 aa22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 LLPHQ9BRT6 129 aaKnown RBP22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 JAG2Q9Y219 1238 aa22.64■■□□□ 1.21
LAPTM4B-204ENST00000619747 KLRK1P26718 216 aa22.63■■□□□ 1.21
LAPTM4B-204ENST00000619747 KIAA2012Q0VF49 1180 aa22.63■■□□□ 1.21
LAPTM4B-204ENST00000619747 IFNL3Q8IZI9 196 aa22.63■■□□□ 1.21
LAPTM4B-204ENST00000619747 MINPP1Q9UNW1 487 aa22.63■■□□□ 1.21
LAPTM4B-204ENST00000619747 MYL10Q9BUA6 226 aa22.63■■□□□ 1.21
LAPTM4B-204ENST00000619747 CPLX1O14810 134 aa22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 PTMAP06454 111 aaKnown RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 ADGRA1Q86SQ6 560 aa22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 ARHGEF1Q92888 912 aaKnown RBP22.62■■□□□ 1.21
LAPTM4B-204ENST00000619747 RAI14Q9P0K7 980 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms