RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 LAMA4Q16363 1823 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 AGLP35573 1532 aa17.36■□□□□ 0.37
SRRT-217ENST00000618411 MRC1P22897 1456 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 MYSM1Q5VVJ2 828 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 ISM2Q6H9L7 571 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 TOGARAM2Q6ZUX3 1019 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 NCAPGQ9BPX3 1015 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 ROBO2Q9HCK4 1378 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 CHRM1P11229 460 aaPredicted RBP17.35■□□□□ 0.37
SRRT-217ENST00000618411 SYNE3Q6ZMZ3 975 aa17.35■□□□□ 0.37
SRRT-217ENST00000618411 MED1Q15648 1581 aaPredicted RBP17.35■□□□□ 0.37
SRRT-217ENST00000618411 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 TC2NQ8N9U0 490 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 FANCLQ9NW38 375 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 FAN1Q9Y2M0 1017 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
SRRT-217ENST00000618411 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 CDC23Q9UJX2 597 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 HOXC9P31274 260 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 SYKP43405 635 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 FOXR1Q6PIV2 292 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 PAXIP1Q6ZW49 1069 aaPredicted RBP17.34■□□□□ 0.37
SRRT-217ENST00000618411 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 MYCBPQ99417 103 aaPredicted RBP17.34■□□□□ 0.37
SRRT-217ENST00000618411 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
SRRT-217ENST00000618411 KDM3BQ7LBC6 1761 aa17.33■□□□□ 0.37
SRRT-217ENST00000618411 TUBBP07437 444 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 ATP2B1P20020 1258 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 HSP90B2PQ58FF3 399 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 NBPF4Q96M43 638 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
SRRT-217ENST00000618411 TEFQ10587 303 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 SPECC1LQ69YQ0 1117 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 FBXL16Q8N461 479 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 PDILTQ8N807 584 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 GBP3Q9H0R5 595 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.36
SRRT-217ENST00000618411 SLIT1O75093 1534 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 PPFIA3O75145 1194 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 CPP00450 1065 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 DSCC1Q9BVC3 393 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 DEF6Q9H4E7 631 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 KCNQ3O43525 872 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
SRRT-217ENST00000618411 CCDC175P0C221 793 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 LRRC31Q6UY01 552 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 ZSWIM4Q9H7M6 989 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 ABCB6Q9NP58 842 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 MED4Q9NPJ6 270 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
SRRT-217ENST00000618411 HPSEQ9Y251 543 aa17.32■□□□□ 0.36
SRRT-217ENST00000618411 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
SRRT-217ENST00000618411 SLC39A14Q15043 492 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 SUGP1Q8IWZ8 645 aaKnown RBP17.31■□□□□ 0.36
SRRT-217ENST00000618411 PNKPQ96T60 521 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 ACBD3Q9H3P7 528 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 WDHD1O75717 1129 aaPredicted RBP17.31■□□□□ 0.36
SRRT-217ENST00000618411 KARSQ15046 597 aaKnown RBP17.31■□□□□ 0.36
SRRT-217ENST00000618411 OTUD7BQ6GQQ9 843 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 EFCAB13Q8IY85 973 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 HAUS7Q99871 368 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
SRRT-217ENST00000618411 FAM237AA0A1B0GTK4 181 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 E7EWF7 191 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 PPFIA4O75335 1185 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 ADKP55263 362 aaKnown RBP17.3■□□□□ 0.36
SRRT-217ENST00000618411 CASP8Q14790 479 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 MRPL44Q9H9J2 332 aaKnown RBP17.3■□□□□ 0.36
SRRT-217ENST00000618411 PTPN21Q16825 1174 aa17.3■□□□□ 0.36
SRRT-217ENST00000618411 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
SRRT-217ENST00000618411 CHGBP05060 677 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 KBTBD3Q8NAB2 608 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 KLHDC4Q8TBB5 520 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 ANKRD24Q8TF21 1146 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 DESI2Q9BSY9 194 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 KIF5CO60282 957 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 MMP14P50281 582 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 PNOCQ13519 176 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 JMYQ8N9B5 988 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 DRC1Q96MC2 740 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 IRX2Q9BZI1 471 aaPredicted RBP17.29■□□□□ 0.36
SRRT-217ENST00000618411 COPRSQ9NQ92 184 aa17.29■□□□□ 0.36
SRRT-217ENST00000618411 LOC102724159A0A0B4J2E5 919 aa17.28■□□□□ 0.36
SRRT-217ENST00000618411 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
SRRT-217ENST00000618411 PWP2Q15269 919 aaKnown RBP17.28■□□□□ 0.36
SRRT-217ENST00000618411 SWT1Q5T5J6 900 aaKnown RBP17.28■□□□□ 0.36
SRRT-217ENST00000618411 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms