RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 EEF1DP29692 281 aaKnown RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 FRMD3A2A2Y4 597 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 LTV1Q96GA3 475 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 SCOCQ9UIL1 159 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 FERMT2Q96AC1 680 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 MTRF1LQ9UGC7 380 aaKnown RBP10.42□□□□□ -0.74
COL12A1-211ENST00000615798 SPG7Q9UQ90 795 aa10.42□□□□□ -0.74
COL12A1-211ENST00000615798 GLE1Q53GS7 698 aaKnown RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 ZSWIM4Q9H7M6 989 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 ZSCAN26Q16670 478 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 TAOK1Q7L7X3 1001 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 PSPC1Q8WXF1 523 aaKnown RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 DDX19AQ9NUU7 478 aaKnown RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 MYOM2P54296 1465 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 KRT75O95678 551 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 MAP7D3Q8IWC1 876 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 FAM186BQ8IYM0 893 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 SMC5Q8IY18 1101 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 NUDT16Q96DE0 195 aaKnown RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 INTS4Q96HW7 963 aaKnown RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 PIK3R4Q99570 1358 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 GOLGA6CA6NDK9 693 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 GOLGA6DP0CG33 693 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 TERF1P54274 439 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 C16orf87Q6PH81 154 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 PFDN4Q9NQP4 134 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 GOLGA6AQ9NYA3 693 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 N4BP2L2Q92802 583 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 TRIM8Q9BZR9 551 aa10.41□□□□□ -0.74
COL12A1-211ENST00000615798 POLR1AO95602 1720 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-211ENST00000615798 GTF2E1P29083 439 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-211ENST00000615798 ARL1P40616 181 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-211ENST00000615798 CROCCP2Q86T23 111 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 BAIAP2L1Q9UHR4 511 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 CEP170Q5SW79 1584 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 NACAP1Q9BZK3 213 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 ARAP3Q8WWN8 1544 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.74
COL12A1-211ENST00000615798 ADGRF5Q8IZF2 1346 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-211ENST00000615798 TRPM2O94759 1503 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 TRAPPC8Q9Y2L5 1435 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 TUBB2AQ13885 445 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 TUBB2BQ9BVA1 445 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 DMTNQ08495 405 aa10.4□□□□□ -0.74
COL12A1-211ENST00000615798 DDX21Q9NR30 783 aaKnown RBP eCLIP10.4□□□□□ -0.74
COL12A1-211ENST00000615798 RHOBTB1O94844 696 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 TMCO5AQ8N6Q1 288 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 TMEM232C9JQI7 657 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 KRT10P13645 584 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 UBAP1Q9NZ09 502 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 PREX2Q70Z35 1606 aa10.4□□□□□ -0.75
COL12A1-211ENST00000615798 TACO1Q9BSH4 297 aaKnown RBP10.4□□□□□ -0.75
COL12A1-211ENST00000615798 SRGAP3O43295 1099 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 MX2P20592 715 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 HSPA1LP34931 641 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 CRCPO75575 148 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 TXNDC2Q86VQ3 553 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 PDRG1Q9NUG6 133 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 USP25Q9UHP3 1055 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 SH2D4AQ9H788 454 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 I3L4J1 428 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 DDX42Q86XP3 938 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL12A1-211ENST00000615798 ERO1AQ96HE7 468 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 CCDC69A6NI79 296 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 IGSF3O75054 1194 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 PYM1Q9BRP8 204 aaKnown RBP10.39□□□□□ -0.75
COL12A1-211ENST00000615798 TATP17735 454 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-211ENST00000615798 CETN1Q12798 172 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 C8orf34Q49A92 452 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
COL12A1-211ENST00000615798 GOLGA8AA7E2F4 631 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 GOLGA8BA8MQT2 603 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 SNX16P57768 344 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 UTP14CQ5TAP6 766 aaKnown RBP10.39□□□□□ -0.75
COL12A1-211ENST00000615798 SAAL1Q96ER3 474 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 COQ7Q99807 217 aa10.39□□□□□ -0.75
COL12A1-211ENST00000615798 PPIP5K1Q6PFW1 1433 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 AKAP2Q9Y2D5 859 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 TSC22D4Q9Y3Q8 395 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 WDR75Q8IWA0 830 aaKnown RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 CCDC89Q8N998 374 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 KDM1AO60341 852 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 ATF3P18847 181 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 ZCRB1Q8TBF4 217 aaKnown RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 TNPO1Q92973 898 aaKnown RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 GNL3LQ9NVN8 582 aaKnown RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 ABCA8O94911 1581 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 S100BP04271 92 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 PPM1FP49593 454 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-211ENST00000615798 VSIG1Q86XK7 387 aa10.38□□□□□ -0.75
COL12A1-211ENST00000615798 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms