RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 BMP2KQ9NSY1 1161 aaPredicted RBP15.12■□□□□ 0.01
TCF3-220ENST00000611869 MTX1Q13505 466 aa15.11■□□□□ 0.01
TCF3-220ENST00000611869 PIGBQ92521 554 aa15.11■□□□□ 0.01
TCF3-220ENST00000611869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
TCF3-220ENST00000611869 PTGS1P23219 599 aa15.11■□□□□ 0.01
TCF3-220ENST00000611869 TMEM87BQ96K49 555 aa15.11■□□□□ 0.01
TCF3-220ENST00000611869 TRIM75PA6NK02 468 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 PHKA1P46020 1223 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 FAM160A1Q05DH4 1040 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 KIF18AQ8NI77 898 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 MROH5Q6ZUA9 1318 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 TECPR2O15040 1411 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 GSDMDP57764 484 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 NRKQ7Z2Y5 1582 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 DIP2BQ9P265 1576 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 LIG1P18858 919 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 PICALMQ13492 652 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 TTC6Q86TZ1 520 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 DEF6Q9H4E7 631 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 PDE6AP16499 860 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 UBASH3AP57075 661 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 GSTO1P78417 241 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 ARHGAP29Q52LW3 1261 aa15.1■□□□□ 0.01
TCF3-220ENST00000611869 ERCC4Q92889 916 aaPredicted RBP15.1■□□□□ 0.01
TCF3-220ENST00000611869 NEMFO60524 1076 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 SKILP12757 684 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 ZNF76P36508 570 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 DHX58Q96C10 678 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 LOC102724428A0A0B4J2F2 783 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 LDHBP07195 334 aaKnown RBP15.09■□□□□ 0.01
TCF3-220ENST00000611869 HIBADHP31937 336 aaKnown RBP15.09■□□□□ 0.01
TCF3-220ENST00000611869 BCAMP50895 628 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 SIK1P57059 783 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 SF3B2Q13435 895 aaKnown RBP15.09■□□□□ 0.01
TCF3-220ENST00000611869 HS1BP3Q53T59 392 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 PDE8BO95263 885 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 ANKRD2Q9GZV1 360 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
TCF3-220ENST00000611869 KCNQ4P56696 695 aa15.08■□□□□ 0.01
TCF3-220ENST00000611869 NECTIN1Q15223 517 aa15.08■□□□□ 0.01
TCF3-220ENST00000611869 ZMYM1Q5SVZ6 1142 aa15.08■□□□□ 0.01
TCF3-220ENST00000611869 TRAPPC3LQ5T215 181 aa15.08■□□□□ 0.01
TCF3-220ENST00000611869 ANO1Q5XXA6 986 aa15.08■□□□□ 0.01
TCF3-220ENST00000611869 ARHGEF28Q8N1W1 1705 aaKnown RBP15.08■□□□□ 0.01
TCF3-220ENST00000611869 URI1O94763 535 aaPredicted RBP15.08■□□□□ 0
TCF3-220ENST00000611869 ZNF804AQ7Z570 1209 aa15.08■□□□□ 0
TCF3-220ENST00000611869 CABP5Q9NP86 173 aa15.08■□□□□ 0
TCF3-220ENST00000611869 TCP11L1Q9NUJ3 509 aa15.08■□□□□ 0
TCF3-220ENST00000611869 COL3A1P02461 1466 aaPredicted RBP15.08■□□□□ 0
TCF3-220ENST00000611869 ADD1P35611 737 aaKnown RBP15.08■□□□□ 0
TCF3-220ENST00000611869 GYG1P46976 350 aa15.08■□□□□ 0
TCF3-220ENST00000611869 KANK3Q6NY19 840 aa15.08■□□□□ 0
TCF3-220ENST00000611869 CLSTN2Q9H4D0 955 aa15.08■□□□□ 0
TCF3-220ENST00000611869 MAST3O60307 1309 aa15.08■□□□□ 0
TCF3-220ENST00000611869 FSD2A1L4K1 749 aa15.08■□□□□ 0
TCF3-220ENST00000611869 IDEP14735 1019 aa15.08■□□□□ 0
TCF3-220ENST00000611869 ATL3Q6DD88 541 aa15.08■□□□□ 0
TCF3-220ENST00000611869 PDCL2Q8N4E4 241 aa15.08■□□□□ 0
TCF3-220ENST00000611869 AATFQ9NY61 560 aaKnown RBP eCLIP15.08■□□□□ 01e-6■■■■■ 43.2
TCF3-220ENST00000611869 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0
TCF3-220ENST00000611869 H7C1W4 665 aa15.07■□□□□ 0
TCF3-220ENST00000611869 SCRN1Q12765 414 aa15.07■□□□□ 0
TCF3-220ENST00000611869 CNBD1Q8NA66 436 aa15.07■□□□□ 0
TCF3-220ENST00000611869 ATP10DQ9P241 1426 aa15.07■□□□□ 0
TCF3-220ENST00000611869 KRT40Q6A162 431 aa15.07■□□□□ 0
TCF3-220ENST00000611869 DIS3L2Q8IYB7 885 aaKnown RBP15.07■□□□□ 0
TCF3-220ENST00000611869 USP28Q96RU2 1077 aa15.07■□□□□ 0
TCF3-220ENST00000611869 GPR108Q9NPR9 543 aa15.07■□□□□ 0
TCF3-220ENST00000611869 RTL9Q8NET4 1388 aa15.07■□□□□ 0
TCF3-220ENST00000611869 hCG_1642624A0A1W2PR95 340 aa15.07■□□□□ 0
TCF3-220ENST00000611869 RIMBP2O15034 1052 aa15.07■□□□□ 0
TCF3-220ENST00000611869 PFKFB2O60825 505 aa15.07■□□□□ 0
TCF3-220ENST00000611869 CRKLP46109 303 aaKnown RBP15.07■□□□□ 0
TCF3-220ENST00000611869 NOM1Q5C9Z4 860 aaKnown RBP15.07■□□□□ 0
TCF3-220ENST00000611869 NLRP10Q86W26 655 aa15.07■□□□□ 0
TCF3-220ENST00000611869 UBXN4Q92575 508 aa15.07■□□□□ 0
TCF3-220ENST00000611869 CIAO1O76071 339 aa15.06■□□□□ 0
TCF3-220ENST00000611869 SPECC1Q5M775 1068 aa15.06■□□□□ 0
TCF3-220ENST00000611869 CCDC12Q8WUD4 166 aaPredicted RBP15.06■□□□□ 0
TCF3-220ENST00000611869 KIF2AO00139 706 aaPredicted RBP15.06■□□□□ 0
TCF3-220ENST00000611869 ZSCAN12O43309 604 aa15.06■□□□□ 0
TCF3-220ENST00000611869 RRP9O43818 475 aaKnown RBP15.06■□□□□ 0
TCF3-220ENST00000611869 SYNE4Q8N205 404 aa15.06■□□□□ 0
TCF3-220ENST00000611869 CBX8Q9HC52 389 aa15.06■□□□□ 0
TCF3-220ENST00000611869 SEC31BQ9NQW1 1179 aa15.06■□□□□ 0
TCF3-220ENST00000611869 OSBP2Q969R2 916 aa15.06■□□□□ 0
TCF3-220ENST00000611869 FBXO3Q9UK99 471 aa15.06■□□□□ 0
TCF3-220ENST00000611869 V9GY48 417 aaPredicted RBP15.06■□□□□ 0
TCF3-220ENST00000611869 TEX35Q5T0J7 233 aa15.06■□□□□ 0
TCF3-220ENST00000611869 KRI1Q8N9T8 703 aaKnown RBP15.06■□□□□ 0
TCF3-220ENST00000611869 ZNF274Q96GC6 653 aaPredicted RBP15.06■□□□□ 0
TCF3-220ENST00000611869 MAP2P11137 1827 aaKnown RBP15.05■□□□□ 0
TCF3-220ENST00000611869 CALM1P0DP23 149 aa15.05■□□□□ 0
TCF3-220ENST00000611869 CALM2P0DP24 149 aa15.05■□□□□ 0
TCF3-220ENST00000611869 CALM3P0DP25 149 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms