RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
LINC00343-208ENST00000599264 GPR182O15218 404 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 HYAL3O43820 417 aaPredicted RBP10.88□□□□□ -0.67
LINC00343-208ENST00000599264 GADD45BO75293 160 aaPredicted RBP10.88□□□□□ -0.67
LINC00343-208ENST00000599264 NFIAQ12857 509 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 RNF43Q68DV7 783 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 BEND4Q6ZU67 534 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 TRIM42Q8IWZ5 723 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 CCDC74AQ96AQ1 378 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 DCTN4Q9UJW0 460 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 TRAK1Q9UPV9 953 aa10.88□□□□□ -0.67
LINC00343-208ENST00000599264 CSRNP1Q96S65 589 aa10.87□□□□□ -0.67
LINC00343-208ENST00000599264 HMX2A2RU54 273 aa10.86□□□□□ -0.67
LINC00343-208ENST00000599264 PTPN12Q05209 780 aaKnown RBP10.86□□□□□ -0.67
LINC00343-208ENST00000599264 ZNF423Q2M1K9 1284 aa10.86□□□□□ -0.67
LINC00343-208ENST00000599264 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
LINC00343-208ENST00000599264 PPP4R2Q9NY27 417 aa10.86□□□□□ -0.67
LINC00343-208ENST00000599264 ITPKAP23677 461 aa10.85□□□□□ -0.67
LINC00343-208ENST00000599264 POU4F3Q15319 338 aa10.85□□□□□ -0.67
LINC00343-208ENST00000599264 B3GALT4O96024 378 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 IGHA2P01877 340 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 MAP4P27816 1152 aaKnown RBP10.84□□□□□ -0.67
LINC00343-208ENST00000599264 RXRBP28702 533 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 USP11P51784 963 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 GIMAP7Q8NHV1 300 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 CORO1BQ9BR76 489 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 YIPF2Q9BWQ6 316 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 ZNF576Q9H609 170 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 PCMTD2Q9NV79 361 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 NLRP2Q9NX02 1062 aa10.84□□□□□ -0.67
LINC00343-208ENST00000599264 ZCCHC6Q5VYS8 1495 aaKnown RBP10.84□□□□□ -0.67
LINC00343-208ENST00000599264 TIAF1O95411 115 aa10.83□□□□□ -0.68
LINC00343-208ENST00000599264 MAOBP27338 520 aa10.83□□□□□ -0.68
LINC00343-208ENST00000599264 GRIK1P39086 918 aa10.83□□□□□ -0.68
LINC00343-208ENST00000599264 PRPF40BQ6NWY9 871 aaKnown RBP10.83□□□□□ -0.68
LINC00343-208ENST00000599264 COBLO75128 1261 aa10.82□□□□□ -0.68
LINC00343-208ENST00000599264 DLGAP3O95886 979 aa10.82□□□□□ -0.68
LINC00343-208ENST00000599264 RPS26P11Q5JNZ5 115 aaPredicted RBP10.82□□□□□ -0.68
LINC00343-208ENST00000599264 TMC7Q7Z402 723 aa10.82□□□□□ -0.68
LINC00343-208ENST00000599264 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
LINC00343-208ENST00000599264 MAPK1P28482 360 aa10.81□□□□□ -0.68
LINC00343-208ENST00000599264 SOX4Q06945 474 aaPredicted RBP10.81□□□□□ -0.68
LINC00343-208ENST00000599264 INTS5Q6P9B9 1019 aaKnown RBP10.81□□□□□ -0.68
LINC00343-208ENST00000599264 ZDHHC13Q8IUH4 622 aa10.81□□□□□ -0.68
LINC00343-208ENST00000599264 NRSN2Q9GZP1 204 aa10.81□□□□□ -0.68
LINC00343-208ENST00000599264 RAD18Q9NS91 495 aa10.81□□□□□ -0.68
LINC00343-208ENST00000599264 SSTR4P31391 388 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 HNRNPUQ00839 825 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC00343-208ENST00000599264 PLCB3Q01970 1234 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 AP3B2Q13367 1082 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 SGO2Q562F6 1265 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 PAOXQ6QHF9 649 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 ABCB6Q9NP58 842 aa10.8□□□□□ -0.68
LINC00343-208ENST00000599264 TGFB1P01137 390 aa10.79□□□□□ -0.68
LINC00343-208ENST00000599264 DRD2P14416 443 aa10.79□□□□□ -0.68
LINC00343-208ENST00000599264 FAM95CA0A1B0GW59 222 aa10.78□□□□□ -0.68
LINC00343-208ENST00000599264 CD97P48960 835 aa10.78□□□□□ -0.68
LINC00343-208ENST00000599264 KCNA1Q09470 495 aa10.78□□□□□ -0.68
LINC00343-208ENST00000599264 GRM2Q14416 872 aa10.78□□□□□ -0.68
LINC00343-208ENST00000599264 SHKBP1Q8TBC3 707 aa10.78□□□□□ -0.68
LINC00343-208ENST00000599264 EPS8L3Q8TE67 593 aaKnown RBP10.78□□□□□ -0.68
LINC00343-208ENST00000599264 ADH5P11766 374 aa10.77□□□□□ -0.69
LINC00343-208ENST00000599264 XRCC5P13010 732 aaKnown RBP10.77□□□□□ -0.69
LINC00343-208ENST00000599264 NFKBIBQ15653 356 aa10.77□□□□□ -0.69
LINC00343-208ENST00000599264 DTHD1Q6ZMT9 781 aa10.77□□□□□ -0.69
LINC00343-208ENST00000599264 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
LINC00343-208ENST00000599264 ATG3Q9NT62 314 aa10.77□□□□□ -0.69
LINC00343-208ENST00000599264 PATL2C9JE40 543 aaKnown RBP10.76□□□□□ -0.69
LINC00343-208ENST00000599264 PDE3AQ14432 1141 aa10.76□□□□□ -0.69
LINC00343-208ENST00000599264 C2CD4AQ8NCU7 369 aaPredicted RBP10.76□□□□□ -0.69
LINC00343-208ENST00000599264 TRIM56Q9BRZ2 755 aaKnown RBP10.76□□□□□ -0.69
LINC00343-208ENST00000599264 WDR64B1ANS9 1081 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 PPP2R3AQ06190 1150 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 AKAP4Q5JQC9 854 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 FBLIM1Q8WUP2 373 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 MFSD14AQ96MC6 490 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 IVNS1ABPQ9Y6Y0 642 aa10.75□□□□□ -0.69
LINC00343-208ENST00000599264 TREHO43280 583 aa10.74□□□□□ -0.69
LINC00343-208ENST00000599264 DSC3Q14574 896 aa10.74□□□□□ -0.69
LINC00343-208ENST00000599264 DYMQ7RTS9 669 aa10.74□□□□□ -0.69
LINC00343-208ENST00000599264 PNMA6FA0A0J9YX94 578 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 FCGRTP55899 365 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 MAP7Q14244 749 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 CPSF6Q16630 551 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC00343-208ENST00000599264 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 GLIS3Q8NEA6 775 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 AP4E1Q9UPM8 1137 aa10.73□□□□□ -0.69
LINC00343-208ENST00000599264 PRR19A6NJB7 356 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 KIAA1324LA8MWY0 1029 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-208ENST00000599264 CTSBP07858 339 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 ENOX2Q16206 610 aaKnown RBP10.72□□□□□ -0.69
LINC00343-208ENST00000599264 FBXL6Q8N531 539 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-208ENST00000599264 METTL22Q9BUU2 404 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-208ENST00000599264 OSBPL1AQ9BXW6 950 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 BCO2Q9BYV7 579 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 GPN3Q9UHW5 284 aaPredicted RBP10.72□□□□□ -0.69
LINC00343-208ENST00000599264 SYNGAP1Q96PV0 1343 aa10.72□□□□□ -0.69
LINC00343-208ENST00000599264 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.71□□□□□ -0.69
LINC00343-208ENST00000599264 ZNF157P51786 506 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms