RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 DHX32Q7L7V1 743 aaKnown RBP23.57■■□□□ 1.36
TRIM47-204ENST00000587339 TDRD7Q8NHU6 1098 aaKnown RBP23.57■■□□□ 1.36
TRIM47-204ENST00000587339 TOB2Q14106 344 aaPredicted RBP23.56■■□□□ 1.36
TRIM47-204ENST00000587339 NAA16Q6N069 864 aaPredicted RBP23.56■■□□□ 1.36
TRIM47-204ENST00000587339 ADGRA1Q86SQ6 560 aa23.56■■□□□ 1.36
TRIM47-204ENST00000587339 LCORLQ8N3X6 602 aa23.56■■□□□ 1.36
TRIM47-204ENST00000587339 TBC1D16Q8TBP0 767 aa23.56■■□□□ 1.36
TRIM47-204ENST00000587339 TPCN1Q9ULQ1 816 aa23.56■■□□□ 1.36
TRIM47-204ENST00000587339 LARGE1O95461 756 aa23.55■■□□□ 1.36
TRIM47-204ENST00000587339 POLLQ9UGP5 575 aa23.55■■□□□ 1.36
TRIM47-204ENST00000587339 LRRC37AA6NMS7 1700 aa23.55■■□□□ 1.36
TRIM47-204ENST00000587339 ALX1Q15699 326 aa23.55■■□□□ 1.36
TRIM47-204ENST00000587339 ME3Q16798 604 aa23.55■■□□□ 1.36
TRIM47-204ENST00000587339 TNPO1Q92973 898 aaKnown RBP23.55■■□□□ 1.36
TRIM47-204ENST00000587339 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.55■■□□□ 1.36
TRIM47-204ENST00000587339 ZMYM6O95789 1325 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 MAGEB6P1A0A0J9YX57 407 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 C6orf229H3BNL8 230 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 FGD1P98174 961 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 Q6ZUG5 572 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 IFNL3Q8IZI9 196 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 WDR66Q8TBY9 1149 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 NSUN4Q96CB9 384 aaKnown RBP23.54■■□□□ 1.36
TRIM47-204ENST00000587339 NAPBQ9H115 298 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 JAG2Q9Y219 1238 aa23.54■■□□□ 1.36
TRIM47-204ENST00000587339 PRDX5P30044 214 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 MECOMQ03112 1051 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 CACNA1SQ13698 1873 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 SPTY2D1Q68D10 685 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-204ENST00000587339 NACAP1Q9BZK3 213 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 TMX4Q9H1E5 349 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-204ENST00000587339 SLC4A4Q9Y6R1 1079 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 SALL1Q9NSC2 1324 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 COL11A2P13942 1736 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-204ENST00000587339 GSG1L2A8MUP6 293 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 H0YIN7 160 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 C2CD5Q86YS7 1000 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 ZNF384Q8TF68 577 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 ZNF622Q969S3 477 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRIM47-204ENST00000587339 EPB41L4AQ9HCS5 686 aaPredicted RBP23.53■■□□□ 1.36
TRIM47-204ENST00000587339 CD209Q9NNX6 404 aa23.53■■□□□ 1.36
TRIM47-204ENST00000587339 EXOSC10Q01780 885 aaKnown RBP23.52■■□□□ 1.36
TRIM47-204ENST00000587339 TMED8Q6PL24 325 aaPredicted RBP23.52■■□□□ 1.36
TRIM47-204ENST00000587339 CCDC83Q8IWF9 413 aa23.52■■□□□ 1.36
TRIM47-204ENST00000587339 PRKAB2O43741 272 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 PKP1Q13835 747 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 NCOA7Q8NI08 942 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 RIOK1Q9BRS2 568 aaKnown RBP23.51■■□□□ 1.35
TRIM47-204ENST00000587339 PDGFDQ9GZP0 370 aaPredicted RBP23.51■■□□□ 1.35
TRIM47-204ENST00000587339 IL1R1P14778 569 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 RALYLQ86SE5 291 aaKnown RBP23.51■■□□□ 1.35
TRIM47-204ENST00000587339 MPNDQ8N594 471 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 LRRC2Q9BYS8 371 aa23.51■■□□□ 1.35
TRIM47-204ENST00000587339 LTBP1Q14766 1721 aa23.5■■□□□ 1.35
TRIM47-204ENST00000587339 LAMA4Q16363 1823 aa23.5■■□□□ 1.35
TRIM47-204ENST00000587339 IGSF3O75054 1194 aa23.5■■□□□ 1.35
TRIM47-204ENST00000587339 TRDNQ13061 729 aa23.5■■□□□ 1.35
TRIM47-204ENST00000587339 DZIP1Q86YF9 867 aaKnown RBP23.5■■□□□ 1.35
TRIM47-204ENST00000587339 BRF1Q92994 677 aa23.5■■□□□ 1.35
TRIM47-204ENST00000587339 TDO2P48775 406 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 STYK1Q6J9G0 422 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 NECAB1Q8N987 351 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 NBPF3Q9H094 633 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 SMC3Q9UQE7 1217 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 LDHBP07195 334 aaKnown RBP23.49■■□□□ 1.35
TRIM47-204ENST00000587339 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 DPP8Q6V1X1 898 aaPredicted RBP23.49■■□□□ 1.35
TRIM47-204ENST00000587339 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 GBP4Q96PP9 640 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 AGXT2Q9BYV1 514 aa23.49■■□□□ 1.35
TRIM47-204ENST00000587339 MCM4P33991 863 aa23.48■■□□□ 1.35
TRIM47-204ENST00000587339 MCM5P33992 734 aa23.48■■□□□ 1.35
TRIM47-204ENST00000587339 CHST3Q7LGC8 479 aa23.48■■□□□ 1.35
TRIM47-204ENST00000587339 TBC1D10CQ8IV04 446 aa23.48■■□□□ 1.35
TRIM47-204ENST00000587339 DYNLL1P63167 89 aaKnown RBP23.47■■□□□ 1.35
TRIM47-204ENST00000587339 ST3GAL1Q11201 340 aa23.47■■□□□ 1.35
TRIM47-204ENST00000587339 MB21D2Q8IYB1 491 aaPredicted RBP23.47■■□□□ 1.35
TRIM47-204ENST00000587339 SDR42E1Q8WUS8 393 aa23.47■■□□□ 1.35
TRIM47-204ENST00000587339 ZC3H12CQ9C0D7 883 aaKnown RBP23.47■■□□□ 1.35
TRIM47-204ENST00000587339 CHRNA5P30532 468 aa23.46■■□□□ 1.35
TRIM47-204ENST00000587339 STK3Q13188 491 aa23.46■■□□□ 1.35
TRIM47-204ENST00000587339 FBXL16Q8N461 479 aa23.46■■□□□ 1.35
TRIM47-204ENST00000587339 SLC16A10Q8TF71 515 aa23.46■■□□□ 1.35
TRIM47-204ENST00000587339 MAST2Q6P0Q8 1798 aa23.46■■□□□ 1.35
TRIM47-204ENST00000587339 RIMBP2O15034 1052 aa23.45■■□□□ 1.35
TRIM47-204ENST00000587339 AATFQ9NY61 560 aaKnown RBP eCLIP23.45■■□□□ 1.35
TRIM47-204ENST00000587339 ZDHHC9Q9Y397 364 aa23.45■■□□□ 1.35
TRIM47-204ENST00000587339 PRC1O43663 620 aa23.45■■□□□ 1.34
TRIM47-204ENST00000587339 CNKSR1Q969H4 720 aa23.45■■□□□ 1.34
TRIM47-204ENST00000587339 COA1Q9GZY4 146 aa23.45■■□□□ 1.34
TRIM47-204ENST00000587339 CCDC88AQ3V6T2 1871 aa23.44■■□□□ 1.34
TRIM47-204ENST00000587339 DUOX1Q9NRD9 1551 aa23.44■■□□□ 1.34
TRIM47-204ENST00000587339 WDR19Q8NEZ3 1342 aa23.44■■□□□ 1.34
TRIM47-204ENST00000587339 CLEC17AQ6ZS10 378 aa23.44■■□□□ 1.34
TRIM47-204ENST00000587339 GJB2P29033 226 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 GSTO1P78417 241 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 CTDSPL2Q05D32 466 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 APOBRQ0VD83 1088 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 GTF3C6Q969F1 213 aa23.43■■□□□ 1.34
TRIM47-204ENST00000587339 BRD1O95696 1058 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms