RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 ADH1AP07327 375 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 SIK1P57059 783 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 TEFQ10587 303 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 SF3B2Q13435 895 aaKnown RBP7.37□□□□□ -1.23
CDH8-213ENST00000584966 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
CDH8-213ENST00000584966 GTPBP3Q969Y2 492 aaKnown RBP7.37□□□□□ -1.23
CDH8-213ENST00000584966 CCDC97Q96F63 343 aaPredicted RBP7.37□□□□□ -1.23
CDH8-213ENST00000584966 GMCL1Q96IK5 515 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 BABAM1Q9NWV8 329 aa7.37□□□□□ -1.23
CDH8-213ENST00000584966 CDV3Q9UKY7 258 aaKnown RBP7.37□□□□□ -1.23
CDH8-213ENST00000584966 C4AP0C0L4 1744 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 OIP5O43482 229 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 COL8A1P27658 744 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 PTGIRP43119 386 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 RAB15P59190 212 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 EIF4A1P60842 406 aaKnown RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 LMOD3Q0VAK6 560 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 SLC27A3Q5K4L6 730 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 ZBTB33Q86T24 672 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 WDR63Q8IWG1 891 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 ZNF784Q8NCA9 323 aaPredicted RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 LINC00116Q8NCU8 138 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 HELBQ8NG08 1087 aaPredicted RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 GDPD2Q9HCC8 539 aa7.36□□□□□ -1.23
CDH8-213ENST00000584966 ZNF330Q9Y3S2 320 aaPredicted RBP7.36□□□□□ -1.23
CDH8-213ENST00000584966 PRAMEF22A3QJZ6 481 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
CDH8-213ENST00000584966 MX2P20592 715 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
CDH8-213ENST00000584966 ZNF827Q17R98 1081 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 AMIGO3Q86WK7 504 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 NGEFQ8N5V2 710 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 KDF1Q8NAX2 398 aaPredicted RBP7.35□□□□□ -1.23
CDH8-213ENST00000584966 TRERF1Q96PN7 1200 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 CCNL1Q9UK58 526 aaPredicted RBP7.35□□□□□ -1.23
CDH8-213ENST00000584966 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 NUP98P52948 1817 aa7.35□□□□□ -1.23
CDH8-213ENST00000584966 IL16Q14005 1332 aa7.34□□□□□ -1.23
CDH8-213ENST00000584966 CYP19A1P11511 503 aaPredicted RBP7.34□□□□□ -1.23
CDH8-213ENST00000584966 PDIA4P13667 645 aaKnown RBP7.34□□□□□ -1.23
CDH8-213ENST00000584966 PDXDC2PQ6P474 469 aa7.34□□□□□ -1.23
CDH8-213ENST00000584966 INTS5Q6P9B9 1019 aaKnown RBP7.34□□□□□ -1.23
CDH8-213ENST00000584966 DNAJC10Q8IXB1 793 aa7.34□□□□□ -1.23
CDH8-213ENST00000584966 TRMT2AQ8IZ69 625 aaKnown RBP7.34□□□□□ -1.23
CDH8-213ENST00000584966 IFT57Q9NWB7 429 aa7.34□□□□□ -1.23
CDH8-213ENST00000584966 USP16Q9Y5T5 823 aa7.34□□□□□ -1.23
CDH8-213ENST00000584966 GIGYF1O75420 1035 aaPredicted RBP7.33□□□□□ -1.24
CDH8-213ENST00000584966 AP1G2O75843 785 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 USP17L8P0C7I0 530 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 GNAI1P63096 354 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 SLC15A2Q16348 729 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 KRT24Q2M2I5 525 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 GAS2L1Q99501 681 aaPredicted RBP7.33□□□□□ -1.24
CDH8-213ENST00000584966 RRAGCQ9HB90 399 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 TSPYL4Q9UJ04 414 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 BCORQ6W2J9 1755 aa7.33□□□□□ -1.24
CDH8-213ENST00000584966 SHISA8B8ZZ34 492 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 LILRA1O75019 489 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 ITGB7P26010 798 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 SLFN5Q08AF3 891 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 SMIM5Q71RC9 77 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 TTC5Q8N0Z6 440 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 C8orf58Q8NAV2 365 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 OXCT2Q9BYC2 517 aaPredicted RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 PDGFDQ9GZP0 370 aaPredicted RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 TBC1D2BQ9UPU7 963 aa7.32□□□□□ -1.24
CDH8-213ENST00000584966 LAS1LQ9Y4W2 734 aaKnown RBP7.32□□□□□ -1.24
CDH8-213ENST00000584966 AFDNP55196 1824 aaKnown RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 PNPLA7Q6ZV29 1317 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 CNTNAP4Q9C0A0 1308 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 H7C1W4 665 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 A1BGP04217 495 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 CRKLP46109 303 aaKnown RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 RNF144AP50876 292 aaPredicted RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 CALD1Q05682 793 aaKnown RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 NBPF10Q6P3W6 841 aaKnown RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 LRP10Q7Z4F1 713 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 ALYREFQ86V81 257 aaKnown RBP7.31□□□□□ -1.24
CDH8-213ENST00000584966 NBPF15Q8N660 670 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 TSPYL6Q8N831 410 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 PRM3Q9NNZ6 103 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 ANKRD36CQ5JPF3 1778 aa7.31□□□□□ -1.24
CDH8-213ENST00000584966 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 C1QTNF9BB2RNN3 333 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 VAMP4O75379 141 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 RPS6KA4O75676 772 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 ABL2P42684 1182 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 EIF5P55010 431 aaKnown RBP7.3□□□□□ -1.24
CDH8-213ENST00000584966 HNRNPUQ00839 825 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDH8-213ENST00000584966 R3HDM1Q15032 1099 aaKnown RBP7.3□□□□□ -1.24
CDH8-213ENST00000584966 DUSP27Q5VZP5 1158 aa7.3□□□□□ -1.24
CDH8-213ENST00000584966 COL23A1Q86Y22 540 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms