RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
TTC39C-208ENST00000584095 SPATA32Q96LK8 384 aa8.79□□□□□ -1
TTC39C-208ENST00000584095 SAMM50Q9Y512 469 aa8.79□□□□□ -1
TTC39C-208ENST00000584095 FAM177BA6PVY3 158 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 H3BRJ5 948 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 SOX1O00570 391 aaPredicted RBP8.78□□□□□ -1
TTC39C-208ENST00000584095 BAG6P46379 1132 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 NFX1Q12986 1120 aaKnown RBP8.78□□□□□ -1
TTC39C-208ENST00000584095 HGSNATQ68CP4 663 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 BNC2Q6ZN30 1099 aaPredicted RBP8.78□□□□□ -1
TTC39C-208ENST00000584095 FAM196AQ6ZSG2 479 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 DPH6Q7L8W6 267 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 ACDQ96AP0 544 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 LNPKQ9C0E8 428 aa8.78□□□□□ -1
TTC39C-208ENST00000584095 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
TTC39C-208ENST00000584095 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
TTC39C-208ENST00000584095 F13A1P00488 732 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 CDC25BP30305 580 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 SOX9P48436 509 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 CABP4P57796 275 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 APOBRQ0VD83 1088 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 SEPT6Q14141 434 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 TXNDC11Q6PKC3 985 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 CACTIN-AS1Q8N1I8 211 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 FBXO27Q8NI29 283 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 GRIN3AQ8TCU5 1115 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 MIR1-1HGQ9H1L0 117 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 CYP8B1Q9UNU6 501 aa8.77□□□□□ -1.01
TTC39C-208ENST00000584095 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 ARNTP27540 789 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 AFF1P51825 1210 aaKnown RBP8.76□□□□□ -1.01
TTC39C-208ENST00000584095 RBL2Q08999 1139 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 ZNF252P-AS1Q0IIN9 211 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 PDZD3Q86UT5 571 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 CCDC84Q86UT8 332 aaPredicted RBP8.76□□□□□ -1.01
TTC39C-208ENST00000584095 IL22RA1Q8N6P7 574 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 GAL3ST3Q96A11 431 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 LRRC3Q9BY71 257 aa8.76□□□□□ -1.01
TTC39C-208ENST00000584095 FAM221AA4D161 298 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 TLR3O15455 904 aaKnown RBP8.75□□□□□ -1.01
TTC39C-208ENST00000584095 STK10O94804 968 aaKnown RBP8.75□□□□□ -1.01
TTC39C-208ENST00000584095 LMNB1P20700 586 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 C8orf86Q6ZUL3 223 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 GATAD2BQ8WXI9 593 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 JARID2Q92833 1246 aaPredicted RBP8.75□□□□□ -1.01
TTC39C-208ENST00000584095 NKD1Q969G9 470 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 SOX17Q9H6I2 414 aaPredicted RBP8.75□□□□□ -1.01
TTC39C-208ENST00000584095 CBX8Q9HC52 389 aa8.75□□□□□ -1.01
TTC39C-208ENST00000584095 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
TTC39C-208ENST00000584095 COL9A2Q14055 689 aaPredicted RBP8.74□□□□□ -1.01
TTC39C-208ENST00000584095 LRRC14Q15048 493 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 SEZ6Q53EL9 994 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 KANK3Q6NY19 840 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 MPRIPQ6WCQ1 1025 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 SLITRK4Q8IW52 837 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 PMFBP1Q8TBY8 1022 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 SLC7A3Q8WY07 619 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 EMILIN2Q9BXX0 1053 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 PPME1Q9Y570 386 aa8.74□□□□□ -1.01
TTC39C-208ENST00000584095 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 LINC01387J3KSC0 135 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 M0R082 166 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 CILPO75339 1184 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 GSTM4Q03013 218 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-208ENST00000584095 AP3B2Q13367 1082 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 DDX54Q8TDD1 881 aaKnown RBP8.73□□□□□ -1.01
TTC39C-208ENST00000584095 SLC16A10Q8TF71 515 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 EDARADDQ8WWZ3 215 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 ZNF587Q96SQ5 575 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-208ENST00000584095 HIRIP3Q9BW71 556 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-208ENST00000584095 ZNF408Q9H9D4 720 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 STRIP2Q9ULQ0 834 aa8.73□□□□□ -1.01
TTC39C-208ENST00000584095 LILRB5O75023 590 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 GSTP1P09211 210 aaKnown RBP8.72□□□□□ -1.01
TTC39C-208ENST00000584095 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 C19orf57Q0VDD7 668 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 MPP2Q14168 576 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 GALNT6Q8NCL4 622 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 IRF7Q92985 503 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 NRSN2Q9GZP1 204 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 MRVI1Q9Y6F6 885 aa8.72□□□□□ -1.01
TTC39C-208ENST00000584095 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
TTC39C-208ENST00000584095 ECEL1O95672 775 aa8.71□□□□□ -1.02
TTC39C-208ENST00000584095 CCDC144BQ3MJ40 725 aa8.71□□□□□ -1.02
TTC39C-208ENST00000584095 MAP1SQ66K74 1059 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-208ENST00000584095 CACNA2D2Q9NY47 1150 aa8.71□□□□□ -1.02
TTC39C-208ENST00000584095 PPT2Q9UMR5 302 aa8.71□□□□□ -1.02
TTC39C-208ENST00000584095 TM4SF5O14894 197 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 FSCN2O14926 492 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 OIP5O43482 229 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 TRIM37O94972 964 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 ETFBP38117 255 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 CWF19L2Q2TBE0 894 aaKnown RBP8.7□□□□□ -1.02
TTC39C-208ENST00000584095 MSL1Q68DK7 614 aa8.7□□□□□ -1.02
TTC39C-208ENST00000584095 SCARA3Q6AZY7 606 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms