RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 IL17REQ8NFR9 667 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 SAP30BPQ9UHR5 308 aaKnown RBP11.67□□□□□ -0.54
MSI2-209ENST00000579483 SLC1A4P43007 532 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 ASAP1Q9ULH1 1129 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 GJB2P29033 226 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 CCNA1P78396 465 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 KCNG4Q8TDN1 519 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 KCNG1Q9UIX4 513 aa11.67□□□□□ -0.54
MSI2-209ENST00000579483 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.66□□□□□ -0.54
MSI2-209ENST00000579483 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 NOP56O00567 594 aaKnown RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 TAF5LO75529 589 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 TRMT1LQ7Z2T5 733 aaKnown RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 KRT2P35908 639 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 PHACTR2O75167 634 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 MTIF2P46199 727 aaKnown RBP11.66□□□□□ -0.54
MSI2-209ENST00000579483 G2E3Q7L622 706 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 SUCLG2Q96I99 432 aa11.66□□□□□ -0.54
MSI2-209ENST00000579483 CAVIN2O95810 425 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 TSHZ3Q63HK5 1081 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 FSIP1Q8NA03 581 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 ZBTB40Q9NUA8 1239 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 NFKBIBQ15653 356 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 KIAA1328Q86T90 577 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 MASTLQ96GX5 879 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 M0QZ92 97 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 Q6ZUG5 572 aa11.65□□□□□ -0.54
MSI2-209ENST00000579483 ZNF804BA4D1E1 1349 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 LPXNO60711 386 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 STAT6P42226 847 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 PRKG1Q13976 671 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 ZRSR2Q15696 482 aaKnown RBP11.65□□□□□ -0.55
MSI2-209ENST00000579483 KLHL10Q6JEL2 608 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 KBTBD3Q8NAB2 608 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 LRRC45Q96CN5 670 aa11.65□□□□□ -0.55
MSI2-209ENST00000579483 AATFQ9NY61 560 aaKnown RBP eCLIP11.65□□□□□ -0.55
MSI2-209ENST00000579483 HS2ST1Q7LGA3 356 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 DBNDD2Q9BQY9 259 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 VPS72Q15906 364 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 TAF12Q16514 161 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 AZI2Q9H6S1 392 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 FAM13AO94988 1023 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
MSI2-209ENST00000579483 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
MSI2-209ENST00000579483 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
MSI2-209ENST00000579483 MMP10P09238 476 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 TEX35Q5T0J7 233 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 HACE1Q8IYU2 909 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 TCP10Q12799 353 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 CIAPIN1Q6FI81 312 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 NCAPD2Q15021 1401 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
MSI2-209ENST00000579483 PRR36Q9H6K5 1346 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 GPAA1O43292 621 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 SPAG1Q07617 926 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 GPCPD1Q9NPB8 672 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 HEG1Q9ULI3 1381 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 HSPA1LP34931 641 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 DNM2P50570 870 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 USP14P54578 494 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
MSI2-209ENST00000579483 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
MSI2-209ENST00000579483 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 NLRX1Q86UT6 975 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 MSANTD4Q8NCY6 345 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 USO1O60763 962 aaKnown RBP11.62□□□□□ -0.55
MSI2-209ENST00000579483 YEATS4O95619 227 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 PCP11498 1178 aaKnown RBP11.62□□□□□ -0.55
MSI2-209ENST00000579483 OSBPP22059 807 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 TBC1D5Q92609 795 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 ATP10DQ9P241 1426 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
MSI2-209ENST00000579483 CREB3L3Q68CJ9 461 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 BRAPQ7Z569 592 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 FMNL3Q8IVF7 1028 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 MAPKAPK5Q8IW41 473 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 TGFBRAP1Q8WUH2 860 aa11.62□□□□□ -0.55
MSI2-209ENST00000579483 PTPDC1A2A3K4 754 aa11.61□□□□□ -0.55
MSI2-209ENST00000579483 NEFHP12036 1026 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms