RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 MMP14P50281 582 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 RBM5P52756 815 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNX11-205ENST00000578861 GTF2IP78347 998 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
SNX11-205ENST00000578861 HDGFL1Q5TGJ6 251 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 TRIM35Q9UPQ4 493 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 ZSWIM8A7E2V4 1837 aa11.44□□□□□ -0.58
SNX11-205ENST00000578861 COL1A1P02452 1464 aaPredicted RBP11.44□□□□□ -0.58
SNX11-205ENST00000578861 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 MYBBP1AQ9BQG0 1328 aaKnown RBP11.43□□□□□ -0.58
SNX11-205ENST00000578861 CAPN2P17655 700 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 KCNA4P22459 653 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 SNAPC2Q13487 334 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 PLBD2Q8NHP8 589 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 ADAMTS19Q8TE59 1207 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 PPM1EQ8WY54 764 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 RUNDC1Q96C34 613 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 LBHD1Q9BQE6 289 aaPredicted RBP11.43□□□□□ -0.58
SNX11-205ENST00000578861 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 COL4A1P02462 1669 aa11.43□□□□□ -0.58
SNX11-205ENST00000578861 PDHXO00330 501 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 FLT3LGP49771 235 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 CFAP100Q494V2 611 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 ANKRD18AQ8IVF6 992 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 USP38Q8NB14 1042 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 C1QTNF1Q9BXJ1 281 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 COA1Q9GZY4 146 aa11.42□□□□□ -0.58
SNX11-205ENST00000578861 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
SNX11-205ENST00000578861 PAK6Q9NQU5 681 aaPredicted RBP11.42□□□□□ -0.58
SNX11-205ENST00000578861 ZNF646O15015 1829 aaPredicted RBP11.42□□□□□ -0.58
SNX11-205ENST00000578861 ADGRA2Q96PE1 1338 aa11.41□□□□□ -0.58
SNX11-205ENST00000578861 IRF6O14896 467 aa11.41□□□□□ -0.58
SNX11-205ENST00000578861 PRMT6Q96LA8 375 aaPredicted RBP11.41□□□□□ -0.58
SNX11-205ENST00000578861 UHRF1Q96T88 793 aaPredicted RBP11.41□□□□□ -0.58
SNX11-205ENST00000578861 ISCA1Q9BUE6 129 aa11.41□□□□□ -0.58
SNX11-205ENST00000578861 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNX11-205ENST00000578861 DBF4Q9UBU7 674 aaPredicted RBP11.41□□□□□ -0.58
SNX11-205ENST00000578861 ADAMTS8Q9UP79 889 aa11.41□□□□□ -0.58
SNX11-205ENST00000578861 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
SNX11-205ENST00000578861 DUSP27Q5VZP5 1158 aa11.4□□□□□ -0.58
SNX11-205ENST00000578861 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
SNX11-205ENST00000578861 ANKLE1Q8NAG6 615 aa11.4□□□□□ -0.58
SNX11-205ENST00000578861 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
SNX11-205ENST00000578861 AOX1Q06278 1338 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 SPDYE2BA6NHP3 402 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 SPDYE5A6NIY4 337 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 ELL2O00472 640 aaPredicted RBP11.39□□□□□ -0.59
SNX11-205ENST00000578861 SPDYE6P0CI01 402 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 CCDC152Q4G0S7 254 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 RIC3Q7Z5B4 369 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 TXNRD3Q86VQ6 643 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 ERO1BQ86YB8 467 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.39□□□□□ -0.59
SNX11-205ENST00000578861 TTYH1Q9H313 450 aaPredicted RBP11.39□□□□□ -0.59
SNX11-205ENST00000578861 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 MUC3AQ02505 3323 aa11.39□□□□□ -0.59
SNX11-205ENST00000578861 TCP10L2B9ZVM9 353 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 TNPO2O14787 897 aaKnown RBP11.38□□□□□ -0.59
SNX11-205ENST00000578861 HOXB7P09629 217 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 TNFAIP1Q13829 316 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNX11-205ENST00000578861 PXYLP1Q8TE99 480 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 JARID2Q92833 1246 aaPredicted RBP11.38□□□□□ -0.59
SNX11-205ENST00000578861 ZKSCAN4Q969J2 545 aaPredicted RBP11.38□□□□□ -0.59
SNX11-205ENST00000578861 ASB2Q96Q27 587 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 PHAXQ9H814 394 aaKnown RBP11.38□□□□□ -0.59
SNX11-205ENST00000578861 MED23Q9ULK4 1368 aa11.38□□□□□ -0.59
SNX11-205ENST00000578861 PIEZO1Q92508 2521 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 CYP2C8P10632 490 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 CCT4P50991 539 aaKnown RBP11.37□□□□□ -0.59
SNX11-205ENST00000578861 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 TMEM39BQ9GZU3 492 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 ARIH1Q9Y4X5 557 aaPredicted RBP11.37□□□□□ -0.59
SNX11-205ENST00000578861 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
SNX11-205ENST00000578861 CACNA1AO00555 2505 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 MYH3P11055 1940 aa11.37□□□□□ -0.59
SNX11-205ENST00000578861 TRIM28Q13263 835 aaKnown RBP11.36□□□□□ -0.59
SNX11-205ENST00000578861 SHHQ15465 462 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 LRRC26Q2I0M4 334 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 CERS5Q8N5B7 392 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 ATXN2LQ8WWM7 1075 aaKnown RBP11.36□□□□□ -0.59
SNX11-205ENST00000578861 WRNIP1Q96S55 665 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 MYD88Q99836 296 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 LRFN3Q9BTN0 628 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
SNX11-205ENST00000578861 ZNF70Q9UC06 446 aaPredicted RBP11.36□□□□□ -0.59
SNX11-205ENST00000578861 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 JAG2Q9Y219 1238 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 SNCAIPQ9Y6H5 919 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 PSME4Q14997 1843 aa11.36□□□□□ -0.59
SNX11-205ENST00000578861 APAF1O14727 1248 aa11.35□□□□□ -0.59
SNX11-205ENST00000578861 HSP90B1P14625 803 aaKnown RBP11.35□□□□□ -0.59
SNX11-205ENST00000578861 KLRK1P26718 216 aa11.35□□□□□ -0.59
SNX11-205ENST00000578861 PPIL2Q13356 520 aa11.35□□□□□ -0.59
SNX11-205ENST00000578861 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
SNX11-205ENST00000578861 NECAB3Q96P71 396 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms