RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CPLX1O14810 134 aa22.14■■□□□ 1.13
SCARF1-206ENST00000573852 IGSF3O75054 1194 aa22.14■■□□□ 1.13
SCARF1-206ENST00000573852 ZFYP08048 801 aaPredicted RBP22.14■■□□□ 1.13
SCARF1-206ENST00000573852 KIF23Q02241 960 aaPredicted RBP22.14■■□□□ 1.13
SCARF1-206ENST00000573852 NCOA7Q8NI08 942 aa22.14■■□□□ 1.13
SCARF1-206ENST00000573852 PFKFB1P16118 471 aa22.13■■□□□ 1.13
SCARF1-206ENST00000573852 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
SCARF1-206ENST00000573852 LRRFIP1Q32MZ4 808 aaKnown RBP22.13■■□□□ 1.13
SCARF1-206ENST00000573852 CCDC85AQ96PX6 553 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-206ENST00000573852 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
SCARF1-206ENST00000573852 KMT5BQ4FZB7 885 aa22.13■■□□□ 1.13
SCARF1-206ENST00000573852 APPBP2Q92624 585 aa22.13■■□□□ 1.13
SCARF1-206ENST00000573852 MROH7-TTC4A0A0A0MT08 1334 aa22.12■■□□□ 1.13
SCARF1-206ENST00000573852 DENND2AQ9ULE3 1009 aa22.12■■□□□ 1.13
SCARF1-206ENST00000573852 DDX60Q8IY21 1712 aaKnown RBP22.12■■□□□ 1.13
SCARF1-206ENST00000573852 CMA1P23946 247 aa22.12■■□□□ 1.13
SCARF1-206ENST00000573852 ISM2Q6H9L7 571 aa22.12■■□□□ 1.13
SCARF1-206ENST00000573852 RALYLQ86SE5 291 aaKnown RBP22.12■■□□□ 1.13
SCARF1-206ENST00000573852 ERO1AQ96HE7 468 aa22.12■■□□□ 1.13
SCARF1-206ENST00000573852 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
SCARF1-206ENST00000573852 ZNF213O14771 459 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 MARCKSP29966 332 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-206ENST00000573852 NKX2-3Q8TAU0 364 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 PPP1R13BQ96KQ4 1090 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 AIFM3Q96NN9 605 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 PODXL2Q9NZ53 605 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 AKAP2Q9Y2D5 859 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 MORC2Q9Y6X9 1032 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-206ENST00000573852 GPAA1O43292 621 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 ELF2Q15723 593 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 CCDC150Q8NCX0 1101 aa22.11■■□□□ 1.13
SCARF1-206ENST00000573852 ZNF397Q8NF99 534 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-206ENST00000573852 SYTL4Q96C24 671 aaPredicted RBP22.11■■□□□ 1.13
SCARF1-206ENST00000573852 ISCA1Q9BUE6 129 aa22.1■■□□□ 1.13
SCARF1-206ENST00000573852 SLU7O95391 586 aaKnown RBP22.1■■□□□ 1.13
SCARF1-206ENST00000573852 NBPF3Q9H094 633 aa22.1■■□□□ 1.13
SCARF1-206ENST00000573852 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
SCARF1-206ENST00000573852 UBR2Q8IWV8 1755 aa22.1■■□□□ 1.13
SCARF1-206ENST00000573852 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
SCARF1-206ENST00000573852 C4BP0C0L5 1744 aa22.09■■□□□ 1.13
SCARF1-206ENST00000573852 KIF2AO00139 706 aaPredicted RBP22.09■■□□□ 1.13
SCARF1-206ENST00000573852 ATF3P18847 181 aa22.09■■□□□ 1.13
SCARF1-206ENST00000573852 SFPQP23246 707 aaKnown RBP eCLIP22.09■■□□□ 1.13
SCARF1-206ENST00000573852 LMOD1P29536 600 aaPredicted RBP22.09■■□□□ 1.13
SCARF1-206ENST00000573852 SLC39A14Q15043 492 aa22.09■■□□□ 1.13
SCARF1-206ENST00000573852 HSD3B7Q9H2F3 369 aa22.09■■□□□ 1.13
SCARF1-206ENST00000573852 CPDO75976 1380 aa22.08■■□□□ 1.13
SCARF1-206ENST00000573852 ATP1A3P13637 1013 aa22.08■■□□□ 1.12
SCARF1-206ENST00000573852 FANCCQ00597 558 aa22.08■■□□□ 1.12
SCARF1-206ENST00000573852 FBXO38Q6PIJ6 1188 aa22.08■■□□□ 1.12
SCARF1-206ENST00000573852 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.12
SCARF1-206ENST00000573852 ERVV-2B6SEH9 535 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 TPM4P67936 248 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 FAM89AQ96GI7 184 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 WDR19Q8NEZ3 1342 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 PSDA5PKW4 1024 aaPredicted RBP22.07■■□□□ 1.12
SCARF1-206ENST00000573852 KIF20AO95235 890 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 TCIRG1Q13488 830 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 SYT10Q6XYQ8 523 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 TAOK2Q9UL54 1235 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
SCARF1-206ENST00000573852 RXRAP19793 462 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 CYB5R4Q7L1T6 521 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 ALG1Q9BT22 464 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 FBXO3Q9UK99 471 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 MYH7P12883 1935 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 IKBKBO14920 756 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 SYKP43405 635 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 L2HGDHQ9H9P8 463 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 ZNF330Q9Y3S2 320 aaPredicted RBP22.06■■□□□ 1.12
SCARF1-206ENST00000573852 ZMYM6O95789 1325 aa22.06■■□□□ 1.12
SCARF1-206ENST00000573852 NPHP1O15259 732 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 MCAMP43121 646 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 TAF7LQ5H9L4 462 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 SHC4Q6S5L8 630 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 VPS37DQ86XT2 251 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 TBC1D10CQ8IV04 446 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 TIGD1Q96MW7 591 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 TUBE1Q9UJT0 475 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 ANGEL1Q9UNK9 670 aaKnown RBP22.05■■□□□ 1.12
SCARF1-206ENST00000573852 HPSEQ9Y251 543 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 TNS3Q68CZ2 1445 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 KCNJ6P48051 423 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 LRRN4CLQ8ND94 238 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 SENP2Q9HC62 589 aa22.05■■□□□ 1.12
SCARF1-206ENST00000573852 KRT40Q6A162 431 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 DPF2Q92785 391 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 CDC27P30260 824 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 METAP2P50579 478 aaKnown RBP eCLIP22.04■■□□□ 1.12
SCARF1-206ENST00000573852 PTPAQ15257 358 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 SYNE4Q8N205 404 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 PHKBQ93100 1093 aa22.04■■□□□ 1.12
SCARF1-206ENST00000573852 CSF1RP07333 972 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 TRDNQ13061 729 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 IFIT5Q13325 482 aaKnown RBP22.03■■□□□ 1.12
SCARF1-206ENST00000573852 PNOCQ13519 176 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 CCDC93Q567U6 631 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
SCARF1-206ENST00000573852 SH2B2O14492 632 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms