RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TUBE1Q9UJT0 475 aa17.75■□□□□ 0.43
SMG6-207ENST00000570756 IVLP07476 585 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 TXLNAP40222 546 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 ZNF530Q6P9A1 599 aaPredicted RBP17.74■□□□□ 0.43
SMG6-207ENST00000570756 OLFM4Q6UX06 510 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 LEKR1Q6ZMV7 388 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 TICAM2Q86XR7 235 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 KBTBD3Q8NAB2 608 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 BAG1Q99933 345 aaPredicted RBP17.74■□□□□ 0.43
SMG6-207ENST00000570756 EPC1Q9H2F5 836 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 MARF1Q9Y4F3 1742 aaKnown RBP17.74■□□□□ 0.43
SMG6-207ENST00000570756 E7EWF7 191 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 STX10O60499 249 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
SMG6-207ENST00000570756 FDPSP14324 419 aaKnown RBP17.74■□□□□ 0.43
SMG6-207ENST00000570756 ACTN2P35609 894 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 LONRF2Q1L5Z9 754 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 GOLGA6L1Q8N7Z2 621 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 DPF2Q92785 391 aa17.74■□□□□ 0.43
SMG6-207ENST00000570756 ANO1Q5XXA6 986 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 DDX46Q7L014 1031 aaKnown RBP17.73■□□□□ 0.43
SMG6-207ENST00000570756 SRLQ86TD4 932 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 TMEM139Q8IV31 216 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 C10orf67Q8IYJ2 551 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 FBXL16Q8N461 479 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 WDR24Q96S15 920 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 C19orf44Q9H6X5 657 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 DDX21Q9NR30 783 aaKnown RBP eCLIP17.73■□□□□ 0.43
SMG6-207ENST00000570756 SYKP43405 635 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
SMG6-207ENST00000570756 AXDND1Q5T1B0 1012 aaPredicted RBP17.73■□□□□ 0.43
SMG6-207ENST00000570756 PALLDQ8WX93 1383 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 HEG1Q9ULI3 1381 aa17.73■□□□□ 0.43
SMG6-207ENST00000570756 POTEB2H3BUK9 544 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 TFCP2Q12800 502 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
SMG6-207ENST00000570756 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 MAP2K7O14733 419 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 MPRIPQ6WCQ1 1025 aa17.72■□□□□ 0.43
SMG6-207ENST00000570756 RRP15Q9Y3B9 282 aaKnown RBP17.72■□□□□ 0.43
SMG6-207ENST00000570756 EIF3JO75822 258 aaKnown RBP17.71■□□□□ 0.43
SMG6-207ENST00000570756 IGKV5-2P06315 115 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 AIMP1Q12904 312 aaKnown RBP17.71■□□□□ 0.43
SMG6-207ENST00000570756 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 ISM2Q6H9L7 571 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 JMYQ8N9B5 988 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 HNRNPLLQ8WVV9 542 aaKnown RBP17.71■□□□□ 0.43
SMG6-207ENST00000570756 KIFC2Q96AC6 838 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 CHGBP05060 677 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 TUBB4BP68371 445 aa17.71■□□□□ 0.43
SMG6-207ENST00000570756 MSL3Q8N5Y2 521 aaKnown RBP17.71■□□□□ 0.43
SMG6-207ENST00000570756 NEURL1BA8MQ27 555 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 RNMTO43148 476 aaKnown RBP17.7■□□□□ 0.42
SMG6-207ENST00000570756 ATF3P18847 181 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 GCKRQ14397 625 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 C1orf141Q5JVX7 400 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 NBPF6Q5VWK0 638 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 HDXQ7Z353 690 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 RGS22Q8NE09 1264 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 ANKRD24Q8TF21 1146 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 IP6K1Q92551 441 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
SMG6-207ENST00000570756 NBPF4Q96M43 638 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 DBNDD2Q9BQY9 259 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 TMEM232C9JQI7 657 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 ERLIN1O75477 346 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 LTN1O94822 1766 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 TBX2Q13207 712 aaPredicted RBP17.7■□□□□ 0.42
SMG6-207ENST00000570756 SLC39A14Q15043 492 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 DHX58Q96C10 678 aa17.7■□□□□ 0.42
SMG6-207ENST00000570756 MROH7-TTC4A0A0A0MT08 1334 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 H3BQF6 201 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 TRIM66O15016 1216 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 CHMP4BP1P59074 171 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 GOLGA8FQ08AF8 430 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 GOLGA8DPQ0D2H9 430 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 PDILTQ8N807 584 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
SMG6-207ENST00000570756 ATG3Q9NT62 314 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 FANCLQ9NW38 375 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 LCMT1Q9UIC8 334 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
SMG6-207ENST00000570756 GYS2P54840 703 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 IRX3P78415 501 aaPredicted RBP17.69■□□□□ 0.42
SMG6-207ENST00000570756 PTPN12Q05209 780 aaKnown RBP17.69■□□□□ 0.42
SMG6-207ENST00000570756 EPHA10Q5JZY3 1008 aa17.69■□□□□ 0.42
SMG6-207ENST00000570756 CPLX1O14810 134 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 CHST3Q7LGC8 479 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 CEP112Q8N8E3 955 aa17.68■□□□□ 0.42
SMG6-207ENST00000570756 HPSEQ9Y251 543 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms