RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 HIF3AQ9Y2N7 669 aa5.68□□□□□ -1.5
CDC27-211ENST00000570740 RSF1Q96T23 1441 aaPredicted RBP5.67□□□□□ -1.5
CDC27-211ENST00000570740 EIF1AYO14602 144 aaKnown RBP5.67□□□□□ -1.5
CDC27-211ENST00000570740 BRD1O95696 1058 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 DLGAP3O95886 979 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 BMP3P12645 472 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 GSTM4Q03013 218 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 NFIAQ12857 509 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 ZNF423Q2M1K9 1284 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 EXOSC6Q5RKV6 272 aaKnown RBP5.67□□□□□ -1.5
CDC27-211ENST00000570740 NUTM2GQ5VZR2 741 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 RNF43Q68DV7 783 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 TRIM42Q8IWZ5 723 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 SMG8Q8ND04 991 aaKnown RBP5.67□□□□□ -1.5
CDC27-211ENST00000570740 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 ALKBH8Q96BT7 664 aaKnown RBP5.67□□□□□ -1.5
CDC27-211ENST00000570740 DMRTB1Q96MA1 342 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 USP26Q9BXU7 913 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 NIF3L1Q9GZT8 377 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 CYP4F12Q9HCS2 524 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 NPHS2Q9NP85 383 aa5.67□□□□□ -1.5
CDC27-211ENST00000570740 HMX2A2RU54 273 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 TIAF1O95411 115 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 ITPKAP23677 461 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 NBPF11Q86T75 865 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 CCDC74AQ96AQ1 378 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 EHD4Q9H223 541 aa5.66□□□□□ -1.5
CDC27-211ENST00000570740 GAS2O43903 313 aaKnown RBP5.65□□□□□ -1.5
CDC27-211ENST00000570740 B3GALT4O96024 378 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 PTPN12Q05209 780 aaKnown RBP5.65□□□□□ -1.5
CDC27-211ENST00000570740 ERICH6BQ5W0A0 696 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 BEND4Q6ZU67 534 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 ZDHHC13Q8IUH4 622 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 C12orf50Q8NA57 414 aaPredicted RBP5.65□□□□□ -1.5
CDC27-211ENST00000570740 CSRNP1Q96S65 589 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 KCNF1Q9H3M0 494 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 ZNF576Q9H609 170 aa5.65□□□□□ -1.5
CDC27-211ENST00000570740 LAMC3Q9Y6N6 1575 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 WIZO95785 1651 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 TGFB1P01137 390 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 CYP11A1P05108 521 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 MAP4P27816 1152 aaKnown RBP5.64□□□□□ -1.51
CDC27-211ENST00000570740 CD97P48960 835 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 SGO2Q562F6 1265 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 PRPF40BQ6NWY9 871 aaKnown RBP5.64□□□□□ -1.51
CDC27-211ENST00000570740 TMC7Q7Z402 723 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 DBNDD2Q9BQY9 259 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 ABCB6Q9NP58 842 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
CDC27-211ENST00000570740 MAOBP27338 520 aa5.63□□□□□ -1.51
CDC27-211ENST00000570740 SSTR4P31391 388 aa5.63□□□□□ -1.51
CDC27-211ENST00000570740 SOX4Q06945 474 aaPredicted RBP5.63□□□□□ -1.51
CDC27-211ENST00000570740 DDX54Q8TDD1 881 aaKnown RBP5.63□□□□□ -1.51
CDC27-211ENST00000570740 BIN2Q9UBW5 565 aaPredicted RBP5.63□□□□□ -1.51
CDC27-211ENST00000570740 TOP2AP11388 1531 aaKnown RBP5.63□□□□□ -1.51
CDC27-211ENST00000570740 TMEM238LA0A1B0GVL6 79 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 PRR19A6NJB7 356 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 KIAA1324LA8MWY0 1029 aaPredicted RBP5.62□□□□□ -1.51
CDC27-211ENST00000570740 COBLO75128 1261 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 GADD45BO75293 160 aaPredicted RBP5.62□□□□□ -1.51
CDC27-211ENST00000570740 CTSBP07858 339 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 DRD2P14416 443 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 GRM2Q14416 872 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 POU4F3Q15319 338 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 HP1BP3Q5SSJ5 553 aaPredicted RBP5.62□□□□□ -1.51
CDC27-211ENST00000570740 C2CD4AQ8NCU7 369 aaPredicted RBP5.62□□□□□ -1.51
CDC27-211ENST00000570740 GLIS3Q8NEA6 775 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 SHKBP1Q8TBC3 707 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
CDC27-211ENST00000570740 ZFYVE1Q9HBF4 777 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 PCMTD2Q9NV79 361 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 TRAK1Q9UPV9 953 aa5.62□□□□□ -1.51
CDC27-211ENST00000570740 MED26O95402 600 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 ADH5P11766 374 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 RXRBP28702 533 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 DSC3Q14574 896 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 RPS26P11Q5JNZ5 115 aaPredicted RBP5.61□□□□□ -1.51
CDC27-211ENST00000570740 CDPF1Q6NVV7 123 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 EPS8L3Q8TE67 593 aaKnown RBP5.61□□□□□ -1.51
CDC27-211ENST00000570740 CORO1BQ9BR76 489 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 PDS5BQ9NTI5 1447 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 CADPSQ9ULU8 1353 aa5.61□□□□□ -1.51
CDC27-211ENST00000570740 ECEL1O95672 775 aa5.6□□□□□ -1.51
CDC27-211ENST00000570740 GRIK1P39086 918 aa5.6□□□□□ -1.51
CDC27-211ENST00000570740 USP11P51784 963 aa5.6□□□□□ -1.51
CDC27-211ENST00000570740 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
CDC27-211ENST00000570740 INTS5Q6P9B9 1019 aaKnown RBP5.6□□□□□ -1.51
CDC27-211ENST00000570740 NPM2Q86SE8 214 aaKnown RBP5.6□□□□□ -1.51
CDC27-211ENST00000570740 EZH1Q92800 747 aaPredicted RBP5.6□□□□□ -1.51
CDC27-211ENST00000570740 MFSD14AQ96MC6 490 aa5.6□□□□□ -1.51
CDC27-211ENST00000570740 FAM95CA0A1B0GW59 222 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 WDR64B1ANS9 1081 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 TREHO43280 583 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 MAPK1P28482 360 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 PLCB3Q01970 1234 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 FAAP100Q0VG06 881 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 NFKBIBQ15653 356 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 PAOXQ6QHF9 649 aa5.59□□□□□ -1.51
CDC27-211ENST00000570740 PI16Q6UXB8 463 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms