RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 WWC3Q9ULE0 1092 aa27.45■■□□□ 1.98
LINC00543-201ENST00000567234 ZMYM6O95789 1325 aa27.45■■□□□ 1.98
LINC00543-201ENST00000567234 A0A0G2JLW4 131 aa27.44■■□□□ 1.98
LINC00543-201ENST00000567234 ZNF213O14771 459 aa27.44■■□□□ 1.98
LINC00543-201ENST00000567234 PFKFB2O60825 505 aa27.44■■□□□ 1.98
LINC00543-201ENST00000567234 ALX1Q15699 326 aa27.44■■□□□ 1.98
LINC00543-201ENST00000567234 ZNF500O60304 480 aaPredicted RBP27.44■■□□□ 1.98
LINC00543-201ENST00000567234 RPS8P62241 208 aaKnown RBP27.44■■□□□ 1.98
LINC00543-201ENST00000567234 LARP1BQ659C4 914 aaKnown RBP27.44■■□□□ 1.98
LINC00543-201ENST00000567234 WDR19Q8NEZ3 1342 aa27.44■■□□□ 1.98
LINC00543-201ENST00000567234 HMGB2P26583 209 aaKnown RBP27.43■■□□□ 1.98
LINC00543-201ENST00000567234 CELF1Q92879 486 aaKnown RBP27.43■■□□□ 1.98
LINC00543-201ENST00000567234 CARMIL3Q8ND23 1372 aa27.42■■□□□ 1.98
LINC00543-201ENST00000567234 GYS1P13807 737 aa27.42■■□□□ 1.98
LINC00543-201ENST00000567234 EVCP57679 992 aa27.42■■□□□ 1.98
LINC00543-201ENST00000567234 SF3B2Q13435 895 aaKnown RBP27.42■■□□□ 1.98
LINC00543-201ENST00000567234 CSPP1Q1MSJ5 1256 aa27.42■■□□□ 1.98
LINC00543-201ENST00000567234 AIDAQ96BJ3 306 aa27.42■■□□□ 1.98
LINC00543-201ENST00000567234 ZNF274Q96GC6 653 aaPredicted RBP27.42■■□□□ 1.98
LINC00543-201ENST00000567234 STRBPQ96SI9 672 aaKnown RBP27.42■■□□□ 1.98
LINC00543-201ENST00000567234 STK3Q13188 491 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 GPT2Q8TD30 523 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 CHAMP1Q96JM3 812 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 ANKRD2Q9GZV1 360 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 CAVIN4Q5BKX8 364 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 COL23A1Q86Y22 540 aaPredicted RBP27.41■■□□□ 1.98
LINC00543-201ENST00000567234 MAGEB6Q8N7X4 407 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 NCOA7Q8NI08 942 aa27.41■■□□□ 1.98
LINC00543-201ENST00000567234 BAG6P46379 1132 aa27.4■■□□□ 1.98
LINC00543-201ENST00000567234 LRRC2Q9BYS8 371 aa27.4■■□□□ 1.98
LINC00543-201ENST00000567234 MB21D2Q8IYB1 491 aaPredicted RBP27.39■■□□□ 1.98
LINC00543-201ENST00000567234 PATL2C9JE40 543 aaKnown RBP27.39■■□□□ 1.97
LINC00543-201ENST00000567234 ZBTB22O15209 634 aa27.39■■□□□ 1.97
LINC00543-201ENST00000567234 HAND2P61296 217 aa27.39■■□□□ 1.97
LINC00543-201ENST00000567234 NFIXQ14938 502 aa27.39■■□□□ 1.97
LINC00543-201ENST00000567234 SMARCC2Q8TAQ2 1214 aa27.39■■□□□ 1.97
LINC00543-201ENST00000567234 SEMA3EO15041 775 aa27.38■■□□□ 1.97
LINC00543-201ENST00000567234 GNAT2P19087 354 aa27.38■■□□□ 1.97
LINC00543-201ENST00000567234 NCLP19338 710 aaKnown RBP27.38■■□□□ 1.97
LINC00543-201ENST00000567234 SCRN1Q12765 414 aa27.38■■□□□ 1.97
LINC00543-201ENST00000567234 CAVIN1Q6NZI2 390 aaKnown RBP27.38■■□□□ 1.97
LINC00543-201ENST00000567234 CCDC24Q8N4L8 307 aa27.38■■□□□ 1.97
LINC00543-201ENST00000567234 NOL7Q9UMY1 257 aaKnown RBP27.38■■□□□ 1.97
LINC00543-201ENST00000567234 PNPLA7Q6ZV29 1317 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 VPS37CA5D8V6 355 aaPredicted RBP27.37■■□□□ 1.97
LINC00543-201ENST00000567234 TM4SF1P30408 202 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 RALYLQ86SE5 291 aaKnown RBP27.37■■□□□ 1.97
LINC00543-201ENST00000567234 APOBRQ0VD83 1088 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 USP48Q86UV5 1035 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 PDLIM2Q96JY6 352 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 LRP2BPQ9P2M1 347 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 DENND2AQ9ULE3 1009 aa27.37■■□□□ 1.97
LINC00543-201ENST00000567234 PDS5AQ29RF7 1337 aaKnown RBP27.36■■□□□ 1.97
LINC00543-201ENST00000567234 CHD4Q14839 1912 aa27.36■■□□□ 1.97
LINC00543-201ENST00000567234 MYH13Q9UKX3 1938 aa27.36■■□□□ 1.97
LINC00543-201ENST00000567234 APPP05067 770 aa27.36■■□□□ 1.97
LINC00543-201ENST00000567234 HMGN5P82970 282 aaKnown RBP27.36■■□□□ 1.97
LINC00543-201ENST00000567234 TNRC6CQ9HCJ0 1690 aaKnown RBP27.36■■□□□ 1.97
LINC00543-201ENST00000567234 GYG1P46976 350 aa27.35■■□□□ 1.97
LINC00543-201ENST00000567234 TRDNQ13061 729 aa27.35■■□□□ 1.97
LINC00543-201ENST00000567234 FBXO33Q7Z6M2 555 aa27.35■■□□□ 1.97
LINC00543-201ENST00000567234 FAM84BQ96KN1 310 aaPredicted RBP27.35■■□□□ 1.97
LINC00543-201ENST00000567234 KIF3AQ9Y496 699 aa27.35■■□□□ 1.97
LINC00543-201ENST00000567234 PRC1O43663 620 aa27.34■■□□□ 1.97
LINC00543-201ENST00000567234 MBD4O95243 580 aa27.34■■□□□ 1.97
LINC00543-201ENST00000567234 PDIA3P30101 505 aaKnown RBP27.34■■□□□ 1.97
LINC00543-201ENST00000567234 ZSCAN23Q3MJ62 389 aa27.34■■□□□ 1.97
LINC00543-201ENST00000567234 VPS37DQ86XT2 251 aa27.34■■□□□ 1.97
LINC00543-201ENST00000567234 NBPF3Q9H094 633 aa27.34■■□□□ 1.97
LINC00543-201ENST00000567234 NPHP1O15259 732 aa27.33■■□□□ 1.97
LINC00543-201ENST00000567234 SLC15A2Q16348 729 aa27.33■■□□□ 1.97
LINC00543-201ENST00000567234 NSUN7Q8NE18 718 aaKnown RBP27.33■■□□□ 1.97
LINC00543-201ENST00000567234 CNPY2Q9Y2B0 182 aa27.33■■□□□ 1.97
LINC00543-201ENST00000567234 FOXD4L6Q3SYB3 417 aaPredicted RBP27.32■■□□□ 1.96
LINC00543-201ENST00000567234 FOXD4L3Q6VB84 417 aaPredicted RBP27.32■■□□□ 1.96
LINC00543-201ENST00000567234 IFNL3Q8IZI9 196 aa27.32■■□□□ 1.96
LINC00543-201ENST00000567234 CNBD1Q8NA66 436 aa27.32■■□□□ 1.96
LINC00543-201ENST00000567234 JAK2O60674 1132 aa27.32■■□□□ 1.96
LINC00543-201ENST00000567234 CDC37L1Q7L3B6 337 aa27.32■■□□□ 1.96
LINC00543-201ENST00000567234 SYAP1Q96A49 352 aaPredicted RBP27.32■■□□□ 1.96
LINC00543-201ENST00000567234 TIAM2Q8IVF5 1701 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 DYNC1I1O14576 645 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 TMED8Q6PL24 325 aaPredicted RBP27.31■■□□□ 1.96
LINC00543-201ENST00000567234 CHST3Q7LGC8 479 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 NACAP1Q9BZK3 213 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 NAPBQ9H115 298 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 COL1A1P02452 1464 aaPredicted RBP27.31■■□□□ 1.96
LINC00543-201ENST00000567234 CACNA1SQ13698 1873 aa27.31■■□□□ 1.96
LINC00543-201ENST00000567234 ANTXR2P58335 489 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 TBC1D10CQ8IV04 446 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 FAM184AQ8NB25 1140 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 ARMT1Q9H993 441 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 GDPD2Q9HCC8 539 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 GSG1L2A8MUP6 293 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 UBE2HP62256 183 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 DDR1Q08345 913 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 EPB41L4AQ9HCS5 686 aaPredicted RBP27.3■■□□□ 1.96
LINC00543-201ENST00000567234 STK32BQ9NY57 414 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 TMEM63CQ9P1W3 806 aa27.3■■□□□ 1.96
LINC00543-201ENST00000567234 NSFL1CQ9UNZ2 370 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms