RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 GCP02774 474 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 ATP1A3P13637 1013 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 ANO1Q5XXA6 986 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 DPF2Q92785 391 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 TSPYL1Q9H0U9 437 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
COMMD4-215ENST00000566843 SLIT3O75094 1523 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 PPFIA3O75145 1194 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 TBC1D8O95759 1140 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 UBASH3AP57075 661 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 LRP10Q7Z4F1 713 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 TMEM139Q8IV31 216 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 TXLNBQ8N3L3 684 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 GPR108Q9NPR9 543 aa18.11■□□□□ 0.49
COMMD4-215ENST00000566843 FAM237AA0A1B0GTK4 181 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 VWA3AA6NCI4 1184 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 POLR3DP05423 398 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-215ENST00000566843 MYL5Q02045 173 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 AFDNP55196 1824 aaKnown RBP18.1■□□□□ 0.49
COMMD4-215ENST00000566843 MAST3O60307 1309 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 SPEF2Q9C093 1822 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 GOLIM4O00461 696 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 CC2D1AQ6P1N0 951 aaPredicted RBP18.1■□□□□ 0.49
COMMD4-215ENST00000566843 CHST3Q7LGC8 479 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 GPR161Q8N6U8 529 aaKnown RBP18.1■□□□□ 0.49
COMMD4-215ENST00000566843 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 HPSEQ9Y251 543 aa18.1■□□□□ 0.49
COMMD4-215ENST00000566843 DDX60Q8IY21 1712 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 ARHGAP6O43182 974 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 SEC31AO94979 1220 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 CASP7P55210 303 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 SLC39A14Q15043 492 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 UTP14AQ9BVJ6 771 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 MROH7-TTC4A0A0A0MT08 1334 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 GOLGA6L9A6NEM1 432 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 RNF113AO15541 343 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 DHX16O60231 1041 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 WDHD1O75717 1129 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 SASH3O75995 380 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 MYL6BP14649 208 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 ZNF790Q6PG37 636 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 SYNE3Q6ZMZ3 975 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 RSRC2Q7L4I2 434 aaKnown RBP18.09■□□□□ 0.49
COMMD4-215ENST00000566843 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
COMMD4-215ENST00000566843 TBX2Q13207 712 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-215ENST00000566843 PPP2R2CQ9Y2T4 447 aa18.08■□□□□ 0.48
COMMD4-215ENST00000566843 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.48
COMMD4-215ENST00000566843 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 ANKRD24Q8TF21 1146 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 GPHNQ9NQX3 736 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-215ENST00000566843 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 POLR3GO15318 223 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-215ENST00000566843 SERPINC1P01008 464 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 TOP1P11387 765 aaKnown RBP18.07■□□□□ 0.48
COMMD4-215ENST00000566843 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 MRFAP1Q9Y605 127 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
COMMD4-215ENST00000566843 PPP6R2O75170 966 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 OAS2P29728 719 aaKnown RBP18.06■□□□□ 0.48
COMMD4-215ENST00000566843 SYKP43405 635 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 ZC3H6P61129 1189 aaKnown RBP18.06■□□□□ 0.48
COMMD4-215ENST00000566843 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 CASQ1P31415 396 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 TTLL5Q6EMB2 1281 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 RABGGTAQ92696 567 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 SMARCE1Q969G3 411 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-215ENST00000566843 ARFGEF2Q9Y6D5 1785 aa18.06■□□□□ 0.48
COMMD4-215ENST00000566843 TMEM232C9JQI7 657 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 M0R2C6 588 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 RAD51AP2Q09MP3 1159 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 SMC1AQ14683 1233 aaKnown RBP18.05■□□□□ 0.48
COMMD4-215ENST00000566843 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-215ENST00000566843 NEK11Q8NG66 645 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 INTS13Q9NVM9 706 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 SCN11AQ9UI33 1791 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 ST5P78524 1137 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 SLC39A6Q13433 755 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 ISM2Q6H9L7 571 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.05■□□□□ 0.48
COMMD4-215ENST00000566843 KIFC2Q96AC6 838 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 PSD3Q9NYI0 1048 aa18.05■□□□□ 0.48
COMMD4-215ENST00000566843 FEZ2Q9UHY8 353 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-215ENST00000566843 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 PPP2R3AQ06190 1150 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 GPS2Q13227 327 aa18.04■□□□□ 0.48
COMMD4-215ENST00000566843 SHC4Q6S5L8 630 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms