RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
MSLN-205ENST00000563941 ZNF532Q9HCE3 1301 aa23.34■■□□□ 1.33
MSLN-205ENST00000563941 ARAP2Q8WZ64 1704 aa23.34■■□□□ 1.33
MSLN-205ENST00000563941 IL6STP40189 918 aaPredicted RBP23.33■■□□□ 1.33
MSLN-205ENST00000563941 UQCRFS1P1P0C7P4 283 aa23.33■■□□□ 1.32
MSLN-205ENST00000563941 CCDC186Q7Z3E2 898 aa23.33■■□□□ 1.32
MSLN-205ENST00000563941 LINC00301Q8NCQ3 95 aa23.33■■□□□ 1.32
MSLN-205ENST00000563941 MYRIPQ8NFW9 859 aa23.33■■□□□ 1.32
MSLN-205ENST00000563941 MRPS27Q92552 414 aaKnown RBP23.33■■□□□ 1.32
MSLN-205ENST00000563941 DENND2AQ9ULE3 1009 aa23.33■■□□□ 1.32
MSLN-205ENST00000563941 GOLGA6L19H0YKK7 550 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 EXOC5O00471 708 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 APPP05067 770 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 PDE6AP16499 860 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 PUM3Q15397 648 aaKnown RBP23.32■■□□□ 1.32
MSLN-205ENST00000563941 ADALQ6DHV7 355 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 ZNF34Q8IZ26 560 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 CLIC4Q9Y696 253 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.32■■□□□ 1.32
MSLN-205ENST00000563941 POLR3DP05423 398 aaPredicted RBP23.32■■□□□ 1.32
MSLN-205ENST00000563941 BRAPQ7Z569 592 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 FAM13BQ9NYF5 915 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 WWC3Q9ULE0 1092 aa23.32■■□□□ 1.32
MSLN-205ENST00000563941 ANGEL1Q9UNK9 670 aaKnown RBP23.32■■□□□ 1.32
MSLN-205ENST00000563941 SLIT2O94813 1529 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 A0A1W2PQ27 194 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 A0A1W2PQ64 194 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 A0A1W2PQD8 194 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 STK38Q15208 465 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 CYB5R4Q7L1T6 521 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 FMR1NBQ8N0W7 255 aaPredicted RBP23.31■■□□□ 1.32
MSLN-205ENST00000563941 HELBQ8NG08 1087 aaPredicted RBP23.31■■□□□ 1.32
MSLN-205ENST00000563941 LPIN2Q92539 896 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 PDCL3Q9H2J4 239 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 GJB4Q9NTQ9 266 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 POLR3EQ9NVU0 708 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 NRBP1Q9UHY1 535 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 MROH5Q6ZUA9 1318 aa23.31■■□□□ 1.32
MSLN-205ENST00000563941 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 TCRBV5S4A2TA0A5A2 114 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 YEATS4O95619 227 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 FGFR2P21802 821 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 MYSM1Q5VVJ2 828 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 NKX2-3Q8TAU0 364 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 ZMYM6O95789 1325 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 WNK3Q9BYP7 1800 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 SF3A1Q15459 793 aaKnown RBP23.3■■□□□ 1.32
MSLN-205ENST00000563941 KCNG4Q8TDN1 519 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 ANO10Q9NW15 660 aa23.3■■□□□ 1.32
MSLN-205ENST00000563941 SH2B2O14492 632 aaPredicted RBP23.29■■□□□ 1.32
MSLN-205ENST00000563941 CDC25BP30305 580 aa23.29■■□□□ 1.32
MSLN-205ENST00000563941 SARM1Q6SZW1 724 aa23.29■■□□□ 1.32
MSLN-205ENST00000563941 CLIP2Q9UDT6 1046 aa23.29■■□□□ 1.32
MSLN-205ENST00000563941 A0A1B0GVL5 298 aa23.29■■□□□ 1.32
MSLN-205ENST00000563941 KIF28PB7ZC32 967 aa23.29■■□□□ 1.32
MSLN-205ENST00000563941 KIF23Q02241 960 aaPredicted RBP23.29■■□□□ 1.32
MSLN-205ENST00000563941 A0A087WWV3 80 aa23.28■■□□□ 1.32
MSLN-205ENST00000563941 AIDAQ96BJ3 306 aa23.28■■□□□ 1.32
MSLN-205ENST00000563941 AK7Q96M32 723 aa23.28■■□□□ 1.32
MSLN-205ENST00000563941 STRBPQ96SI9 672 aaKnown RBP23.28■■□□□ 1.32
MSLN-205ENST00000563941 SPTLC2O15270 562 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 METAP2P50579 478 aaKnown RBP eCLIP23.27■■□□□ 1.32
MSLN-205ENST00000563941 NDUFA8P51970 172 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 LRMPQ12912 555 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 DOCK2Q92608 1830 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 B4E1Z4 1266 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 SLC5A1P13866 664 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 SPATA5Q8NB90 893 aa23.27■■□□□ 1.32
MSLN-205ENST00000563941 COL16A1Q07092 1604 aaPredicted RBP23.27■■□□□ 1.31
MSLN-205ENST00000563941 BECN2A8MW95 431 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 APOA5Q6Q788 366 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 DHX40Q8IX18 779 aaKnown RBP23.26■■□□□ 1.31
MSLN-205ENST00000563941 RGS22Q8NE09 1264 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 ERCC4Q92889 916 aaPredicted RBP23.26■■□□□ 1.31
MSLN-205ENST00000563941 SDF4Q9BRK5 362 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 NEDD4P46934 1319 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 CDKL5O76039 1030 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 SUSD4Q5VX71 490 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 CEP57L1Q8IYX8 460 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 TMEM87BQ96K49 555 aa23.26■■□□□ 1.31
MSLN-205ENST00000563941 ECM29Q5VYK3 1845 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 RXRAP19793 462 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 EIF5P55010 431 aaKnown RBP23.25■■□□□ 1.31
MSLN-205ENST00000563941 ALX1Q15699 326 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 ANO1Q5XXA6 986 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 ALG1Q9BT22 464 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 SENP2Q9HC62 589 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 CHD4Q14839 1912 aa23.25■■□□□ 1.31
MSLN-205ENST00000563941 RASGRF1Q13972 1273 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 CCDC144BQ3MJ40 725 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 CCDC144CPQ8IYA2 1237 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 MRFAP1L1Q96HT8 127 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 AIFM3Q96NN9 605 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 MAP7D2Q96T17 732 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.31
MSLN-205ENST00000563941 MAGEB6Q8N7X4 407 aa23.24■■□□□ 1.31
MSLN-205ENST00000563941 EPB41L4AQ9HCS5 686 aaPredicted RBP23.24■■□□□ 1.31
MSLN-205ENST00000563941 ROBO1Q9Y6N7 1651 aa23.23■■□□□ 1.31
MSLN-205ENST00000563941 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms