RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 IGLV1-40P01703 118 aa7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 MAPK8P45983 427 aa7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 GSTM4Q03013 218 aa7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 WWC3Q9ULE0 1092 aa7.65□□□□□ -1.18
CTDSPL2-207ENST00000559738 HMX2A2RU54 273 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 GSC2O15499 205 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 B3GALT4O96024 378 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 PTPN12Q05209 780 aaKnown RBP7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 SLC51AQ86UW1 340 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 BCO2Q9BYV7 579 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 TRAK1Q9UPV9 953 aa7.64□□□□□ -1.19
CTDSPL2-207ENST00000559738 KRTAP9-6A0A140TA67 174 aa7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 GAS2O43903 313 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 P4HBP07237 508 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 BMP3P12645 472 aa7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 FAAP100Q0VG06 881 aa7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 TRIM56Q9BRZ2 755 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 KCNF1Q9H3M0 494 aa7.63□□□□□ -1.19
CTDSPL2-207ENST00000559738 MEGF11A6BM72 1044 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 CTSBP07858 339 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 NFIAQ12857 509 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 NXPE4Q6UWF7 544 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 TMPRSS13Q9BYE2 586 aa7.62□□□□□ -1.19
CTDSPL2-207ENST00000559738 ECEL1O95672 775 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 TGFB1P01137 390 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 SSTR4P31391 388 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 FCGRTP55899 365 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 HIF3AQ9Y2N7 669 aa7.61□□□□□ -1.19
CTDSPL2-207ENST00000559738 MAOBP27338 520 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 ZNF157P51786 506 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 RNF43Q68DV7 783 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 ZDHHC13Q8IUH4 622 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 CLEC10AQ8IUN9 316 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 FBF1Q8TES7 1133 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 FAM83CQ9BQN1 747 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 OSBPL7Q9BZF2 842 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 CYP4F12Q9HCS2 524 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 PCMTD2Q9NV79 361 aa7.6□□□□□ -1.19
CTDSPL2-207ENST00000559738 CD97P48960 835 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 SGO2Q562F6 1265 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 DTHD1Q6ZMT9 781 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 SMG8Q8ND04 991 aaKnown RBP7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 C3orf58Q8NDZ4 430 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 DBNDD2Q9BQY9 259 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 SUGCTQ9HAC7 445 aa7.59□□□□□ -1.19
CTDSPL2-207ENST00000559738 ANKRD33BA6NCL7 494 aa7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 TIAF1O95411 115 aa7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 CYP11A1P05108 521 aa7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 MAP4P27816 1152 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 POU4F3Q15319 338 aa7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 EXOSC6Q5RKV6 272 aaKnown RBP7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 ALG1LQ6GMV1 187 aa7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 DNAJC14Q6Y2X3 702 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-207ENST00000559738 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-207ENST00000559738 LDHBP07195 334 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-207ENST00000559738 DRD2P14416 443 aa7.57□□□□□ -1.2
CTDSPL2-207ENST00000559738 RXRBP28702 533 aa7.57□□□□□ -1.2
CTDSPL2-207ENST00000559738 PPP4R2Q9NY27 417 aa7.57□□□□□ -1.2
CTDSPL2-207ENST00000559738 XRCC5P13010 732 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 ATP2B2Q01814 1243 aa7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 SHKBP1Q8TBC3 707 aa7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 GZF1Q9H116 711 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 RNF19AQ9NV58 838 aa7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 AKAP2Q9Y2D5 859 aa7.56□□□□□ -1.2
CTDSPL2-207ENST00000559738 COBLO75128 1261 aa7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 MED26O95402 600 aa7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 NPAS4Q8IUM7 802 aa7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 DDX54Q8TDD1 881 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 MFSD14AQ96MC6 490 aa7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 CORO1BQ9BR76 489 aa7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 GPN3Q9UHW5 284 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-207ENST00000559738 PRR19A6NJB7 356 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 ADH5P11766 374 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 USP11P51784 963 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 SOX4Q06945 474 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 AP3B2Q13367 1082 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 COL19A1Q14993 1142 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 C2CD4AQ8NCU7 369 aaPredicted RBP7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 STK35Q8TDR2 534 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 ZFYVE1Q9HBF4 777 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
CTDSPL2-207ENST00000559738 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 KIAA1324LA8MWY0 1029 aaPredicted RBP7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 GSTT1P30711 240 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 GRIK1P39086 918 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 CDPF1Q6NVV7 123 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 FBXL6Q8N531 539 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 FBLIM1Q8WUP2 373 aa7.53□□□□□ -1.2
CTDSPL2-207ENST00000559738 ZC3H12CQ9C0D7 883 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms