RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NFX1Q12986 1120 aaKnown RBP17.05■□□□□ 0.32
CASC4-208ENST00000559151 C20orf204Q6ZNR8 217 aa17.05■□□□□ 0.32
CASC4-208ENST00000559151 SOX1O00570 391 aaPredicted RBP17.04■□□□□ 0.32
CASC4-208ENST00000559151 ZNF787Q6DD87 383 aa17.04■□□□□ 0.32
CASC4-208ENST00000559151 TRIM42Q8IWZ5 723 aa17.04■□□□□ 0.32
CASC4-208ENST00000559151 IL22RA1Q8N6P7 574 aa17.04■□□□□ 0.32
CASC4-208ENST00000559151 H3BRJ5 948 aa17.03■□□□□ 0.32
CASC4-208ENST00000559151 LMNB1P20700 586 aa17.03■□□□□ 0.32
CASC4-208ENST00000559151 HGSNATQ68CP4 663 aa17.03■□□□□ 0.32
CASC4-208ENST00000559151 BNC2Q6ZN30 1099 aaPredicted RBP17.03■□□□□ 0.32
CASC4-208ENST00000559151 ARMC5Q96C12 935 aa17.03■□□□□ 0.32
CASC4-208ENST00000559151 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
CASC4-208ENST00000559151 ADAMTS2O95450 1211 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 TXNDC11Q6PKC3 985 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 CACTIN-AS1Q8N1I8 211 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 GRIN3AQ8TCU5 1115 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 CBX8Q9HC52 389 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
CASC4-208ENST00000559151 ARNTP27540 789 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 CRKP46108 304 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 BAG6P46379 1132 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
CASC4-208ENST00000559151 SEPT6Q14141 434 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 MIR1-1HGQ9H1L0 117 aa17.01■□□□□ 0.31
CASC4-208ENST00000559151 F13A1P00488 732 aa17■□□□□ 0.31
CASC4-208ENST00000559151 AFF1P51825 1210 aaKnown RBP17■□□□□ 0.31
CASC4-208ENST00000559151 FAM196AQ6ZSG2 479 aa17■□□□□ 0.31
CASC4-208ENST00000559151 C8orf86Q6ZUL3 223 aa17■□□□□ 0.31
CASC4-208ENST00000559151 CYP8B1Q9UNU6 501 aa17■□□□□ 0.31
CASC4-208ENST00000559151 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
CASC4-208ENST00000559151 LLGL2Q6P1M3 1020 aa16.99■□□□□ 0.31
CASC4-208ENST00000559151 SLC7A3Q8WY07 619 aa16.99■□□□□ 0.31
CASC4-208ENST00000559151 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
CASC4-208ENST00000559151 PPME1Q9Y570 386 aa16.99■□□□□ 0.31
CASC4-208ENST00000559151 LINC01387J3KSC0 135 aa16.98■□□□□ 0.31
CASC4-208ENST00000559151 LRRC14Q15048 493 aa16.98■□□□□ 0.31
CASC4-208ENST00000559151 FBXO27Q8NI29 283 aa16.98■□□□□ 0.31
CASC4-208ENST00000559151 EDARADDQ8WWZ3 215 aa16.98■□□□□ 0.31
CASC4-208ENST00000559151 M0R082 166 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 TLR3O15455 904 aaKnown RBP16.97■□□□□ 0.31
CASC4-208ENST00000559151 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 DPH6Q7L8W6 267 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 GALNT6Q8NCL4 622 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 ZNF417Q8TAU3 575 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
CASC4-208ENST00000559151 IRF7Q92985 503 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 NKD1Q969G9 470 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 ZNF587Q96SQ5 575 aaPredicted RBP16.97■□□□□ 0.31
CASC4-208ENST00000559151 EMILIN2Q9BXX0 1053 aa16.97■□□□□ 0.31
CASC4-208ENST00000559151 LILRB5O75023 590 aa16.96■□□□□ 0.31
CASC4-208ENST00000559151 GSTM4Q03013 218 aa16.96■□□□□ 0.31
CASC4-208ENST00000559151 CHSY3Q70JA7 882 aa16.96■□□□□ 0.31
CASC4-208ENST00000559151 STK10O94804 968 aaKnown RBP16.95■□□□□ 0.3
CASC4-208ENST00000559151 SOX9P48436 509 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 ZNF252P-AS1Q0IIN9 211 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 PDZD3Q86UT5 571 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 CCDC84Q86UT8 332 aaPredicted RBP16.95■□□□□ 0.3
CASC4-208ENST00000559151 GATAD2BQ8WXI9 593 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 GAL3ST3Q96A11 431 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
CASC4-208ENST00000559151 SOX17Q9H6I2 414 aaPredicted RBP16.95■□□□□ 0.3
CASC4-208ENST00000559151 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
CASC4-208ENST00000559151 AP3B2Q13367 1082 aa16.94■□□□□ 0.3
CASC4-208ENST00000559151 MPRIPQ6WCQ1 1025 aa16.94■□□□□ 0.3
CASC4-208ENST00000559151 FAM221AA4D161 298 aa16.93■□□□□ 0.3
CASC4-208ENST00000559151 PIP4K2BP78356 416 aa16.93■□□□□ 0.3
CASC4-208ENST00000559151 RBL2Q08999 1139 aa16.93■□□□□ 0.3
CASC4-208ENST00000559151 SEZ6Q53EL9 994 aa16.93■□□□□ 0.3
CASC4-208ENST00000559151 PMFBP1Q8TBY8 1022 aa16.93■□□□□ 0.3
CASC4-208ENST00000559151 GSTP1P09211 210 aaKnown RBP16.92■□□□□ 0.3
CASC4-208ENST00000559151 COL9A2Q14055 689 aaPredicted RBP16.92■□□□□ 0.3
CASC4-208ENST00000559151 FAM117BQ6P1L5 589 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 WFDC8Q8IUA0 241 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 SLITRK4Q8IW52 837 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 BTBD6Q96KE9 485 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 CARD10Q9BWT7 1032 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 LRRC3Q9BY71 257 aa16.92■□□□□ 0.3
CASC4-208ENST00000559151 ROBO2Q9HCK4 1378 aa16.91■□□□□ 0.3
CASC4-208ENST00000559151 SHISA8B8ZZ34 492 aa16.91■□□□□ 0.3
CASC4-208ENST00000559151 OIP5O43482 229 aa16.91■□□□□ 0.3
CASC4-208ENST00000559151 PTPN11Q06124 597 aaPredicted RBP16.91■□□□□ 0.3
CASC4-208ENST00000559151 C19orf57Q0VDD7 668 aa16.91■□□□□ 0.3
CASC4-208ENST00000559151 MAP1SQ66K74 1059 aaPredicted RBP16.91■□□□□ 0.3
CASC4-208ENST00000559151 ZC3H12CQ9C0D7 883 aaKnown RBP16.91■□□□□ 0.3
CASC4-208ENST00000559151 ARL4DP49703 201 aa16.9■□□□□ 0.3
CASC4-208ENST00000559151 MPP2Q14168 576 aa16.9■□□□□ 0.3
CASC4-208ENST00000559151 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
CASC4-208ENST00000559151 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
CASC4-208ENST00000559151 FSCN2O14926 492 aa16.89■□□□□ 0.29
CASC4-208ENST00000559151 CILPO75339 1184 aa16.89■□□□□ 0.29
CASC4-208ENST00000559151 KCNB2Q92953 911 aa16.89■□□□□ 0.29
CASC4-208ENST00000559151 WNT8BQ93098 351 aa16.89■□□□□ 0.29
CASC4-208ENST00000559151 MRVI1Q9Y6F6 885 aa16.89■□□□□ 0.29
CASC4-208ENST00000559151 ECEL1O95672 775 aa16.88■□□□□ 0.29
CASC4-208ENST00000559151 NRSN2Q9GZP1 204 aa16.88■□□□□ 0.29
CASC4-208ENST00000559151 ZNF408Q9H9D4 720 aa16.88■□□□□ 0.29
CASC4-208ENST00000559151 OSGEPQ9NPF4 335 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms