RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 USP19O94966 1318 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 CRB1P82279 1406 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 MYOM1P52179 1685 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 ZBTB7CA1YPR0 619 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 NEURL1BA8MQ27 555 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 ADH6P28332 368 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 LRRC69Q6ZNQ3 347 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 RHPN1Q8TCX5 695 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 DCAF5Q96JK2 942 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 MARK1Q9P0L2 795 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 KLF15Q9UIH9 416 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 GOLGB1Q14789 3259 aaKnown RBP8.72□□□□□ -1.01
ZEB1-211ENST00000558440 QRICH2Q9H0J4 1663 aa8.72□□□□□ -1.01
ZEB1-211ENST00000558440 C21orf2O43822 256 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 GCP02774 474 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-211ENST00000558440 AMPD1P23109 780 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 SEC13P55735 322 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 DDB1Q16531 1140 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 PLA2G4EQ3MJ16 856 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 ZNF468Q5VIY5 522 aaPredicted RBP8.71□□□□□ -1.02
ZEB1-211ENST00000558440 PHACTR1Q9C0D0 580 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 NEUROD4Q9HD90 331 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 COL18A1P39060 1754 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 PPIP5K1Q6PFW1 1433 aa8.71□□□□□ -1.02
ZEB1-211ENST00000558440 PLSCR1O15162 318 aa8.7□□□□□ -1.02
ZEB1-211ENST00000558440 PPP1R12BO60237 982 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-211ENST00000558440 SRPK2P78362 688 aaKnown RBP8.7□□□□□ -1.02
ZEB1-211ENST00000558440 PTK7Q13308 1070 aa8.7□□□□□ -1.02
ZEB1-211ENST00000558440 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-211ENST00000558440 STAG2Q8N3U4 1231 aa8.7□□□□□ -1.02
ZEB1-211ENST00000558440 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
ZEB1-211ENST00000558440 HCN4Q9Y3Q4 1203 aa8.7□□□□□ -1.02
ZEB1-211ENST00000558440 BRD4O60885 1362 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-211ENST00000558440 PIK3C2AO00443 1686 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 CEP350Q5VT06 3117 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 TOM1L2Q6ZVM7 507 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 FCHSD1Q86WN1 690 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 SPOCK3Q9BQ16 436 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 PRR12Q9ULL5 1215 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 AATKQ6ZMQ8 1374 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 SLIT3O75094 1523 aa8.69□□□□□ -1.02
ZEB1-211ENST00000558440 FAM196BA6NMK8 535 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L15C9J2P7 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L10C9JJH3 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L13C9JLJ4 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L11C9JVI0 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L21D6R901 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L18D6R9N7 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L22D6RA61 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L17D6RBQ6 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L19D6RCP7 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L20D6RJB6 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 ZBTB7AO95365 584 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP17L24Q0WX57 530 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 LINC00114Q6XXX2 140 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 GAS2L2Q8NHY3 880 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 SCG3Q8WXD2 468 aaKnown RBP8.68□□□□□ -1.02
ZEB1-211ENST00000558440 C2orf49Q9BVC5 232 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-211ENST00000558440 STK32BQ9NY57 414 aa8.68□□□□□ -1.02
ZEB1-211ENST00000558440 USP6P35125 1406 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 DGKGP49619 791 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 PCBP4P57723 403 aaKnown RBP8.67□□□□□ -1.02
ZEB1-211ENST00000558440 DPYDQ12882 1025 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 CHSY3Q70JA7 882 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 HSH2DQ96JZ2 352 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 VRTNQ9H8Y1 702 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 CENPJQ9HC77 1338 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-211ENST00000558440 ANKIB1Q9P2G1 1089 aa8.67□□□□□ -1.02
ZEB1-211ENST00000558440 NHSQ6T4R5 1651 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 BCL9O00512 1426 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 WDR17Q8IZU2 1322 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 SFSWAPQ12872 951 aaKnown RBP8.66□□□□□ -1.02
ZEB1-211ENST00000558440 ANKMY2Q8IV38 441 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 ALDH16A1Q8IZ83 802 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 MARCH10Q8NA82 808 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-211ENST00000558440 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-211ENST00000558440 BTAF1O14981 1849 aa8.66□□□□□ -1.02
ZEB1-211ENST00000558440 CPSF1Q10570 1443 aaKnown RBP8.65□□□□□ -1.02
ZEB1-211ENST00000558440 ITGB2P05107 769 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 GRIN2CQ14957 1233 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 TXNRD1Q16881 649 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 PTF1AQ7RTS3 328 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 ALYREFQ86V81 257 aaKnown RBP8.65□□□□□ -1.02
ZEB1-211ENST00000558440 SUSD3Q96L08 255 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 LTN1O94822 1766 aa8.65□□□□□ -1.02
ZEB1-211ENST00000558440 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
ZEB1-211ENST00000558440 PIK3R2O00459 728 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 EXOC5O00471 708 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 GNB5O14775 395 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 COL8A1P27658 744 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 TYRO3Q06418 890 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 SLC15A2Q16348 729 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 SYT9Q86SS6 491 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 ZNF280CQ8ND82 737 aa8.64□□□□□ -1.03
ZEB1-211ENST00000558440 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms