RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 NPHS2Q9NP85 383 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 TRAK1Q9UPV9 953 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 LMTK3Q96Q04 1460 aa6.19□□□□□ -1.42
LRRC28-205ENST00000558248 ERCC6L2Q5T890 1561 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 A0A096LPE4 126 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 A0A1W2PPZ6 126 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 ALX3O95076 343 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 KIAA0319Q5VV43 1072 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 VN1R5Q7Z5H4 357 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 DZIP1LQ8IYY4 767 aaKnown RBP6.18□□□□□ -1.42
LRRC28-205ENST00000558248 AGGF1Q8N302 714 aaeCLIP6.18□□□□□ -1.42
LRRC28-205ENST00000558248 CCDC74AQ96AQ1 378 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 MEGF10Q96KG7 1140 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 SSBP4Q9BWG4 385 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-205ENST00000558248 CLEC4MQ9H2X3 399 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-205ENST00000558248 SOX17Q9H6I2 414 aaPredicted RBP6.18□□□□□ -1.42
LRRC28-205ENST00000558248 NLRP2Q9NX02 1062 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 PPP4R2Q9NY27 417 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 HECW2Q9P2P5 1572 aa6.18□□□□□ -1.42
LRRC28-205ENST00000558248 SOGA1O94964 1423 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 POLA1P09884 1462 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-205ENST00000558248 SART1O43290 800 aaKnown RBP6.17□□□□□ -1.42
LRRC28-205ENST00000558248 WISP1O95388 367 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 UVSSAQ2YD98 709 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 HP1BP3Q5SSJ5 553 aaPredicted RBP6.17□□□□□ -1.42
LRRC28-205ENST00000558248 Q6ZS46 218 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 USP26Q9BXU7 913 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 RNF208Q9H0X6 261 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 KCNK4Q9NYG8 393 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 DNMBPQ6XZF7 1577 aa6.17□□□□□ -1.42
LRRC28-205ENST00000558248 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 SOX1O00570 391 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-205ENST00000558248 DDX3YO15523 660 aaKnown RBP6.16□□□□□ -1.42
LRRC28-205ENST00000558248 ADAM11O75078 769 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 ESRRAP11474 423 aaPredicted RBP6.16□□□□□ -1.42
LRRC28-205ENST00000558248 PLCB3Q01970 1234 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 GSTM4Q03013 218 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 PCDH1Q08174 1060 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 ANKRD34AQ69YU3 496 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 FDX2Q6P4F2 183 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 UBASH3BQ8TF42 649 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 TCF12Q99081 682 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 ZFYVE1Q9HBF4 777 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 USP35Q9P2H5 1018 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 PRDM2Q13029 1718 aa6.16□□□□□ -1.42
LRRC28-205ENST00000558248 SYNJ2O15056 1496 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 DHX15O43143 795 aaKnown RBP6.15□□□□□ -1.42
LRRC28-205ENST00000558248 TREHO43280 583 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 IGHA2P01877 340 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 NUTM2GQ5VZR2 741 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 PRR23CQ6ZRP0 262 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
LRRC28-205ENST00000558248 UTP4Q969X6 686 aaKnown RBP6.15□□□□□ -1.42
LRRC28-205ENST00000558248 MAGI1Q96QZ7 1491 aaPredicted RBP6.15□□□□□ -1.43
LRRC28-205ENST00000558248 PNMA6FA0A0J9YX94 578 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 CYP11A1P05108 521 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 GRIA4P48058 902 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 HNRNPUQ00839 825 aaKnown RBP eCLIP6.14□□□□□ -1.43
LRRC28-205ENST00000558248 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 PTPN12Q05209 780 aaKnown RBP6.14□□□□□ -1.43
LRRC28-205ENST00000558248 SPRED3Q2MJR0 410 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 PRSS36Q5K4E3 855 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 PRPF40BQ6NWY9 871 aaKnown RBP6.14□□□□□ -1.43
LRRC28-205ENST00000558248 CYP4F12Q9HCS2 524 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 ADGRL1O94910 1474 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 ABCC10Q5T3U5 1492 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 KDM6BO15054 1643 aa6.14□□□□□ -1.43
LRRC28-205ENST00000558248 TM4SF5O14894 197 aa6.13□□□□□ -1.43
LRRC28-205ENST00000558248 GAS2O43903 313 aaKnown RBP6.13□□□□□ -1.43
LRRC28-205ENST00000558248 ITPKAP23677 461 aa6.13□□□□□ -1.43
LRRC28-205ENST00000558248 ASB16Q96NS5 453 aa6.13□□□□□ -1.43
LRRC28-205ENST00000558248 CHMP4AQ9BY43 222 aa6.13□□□□□ -1.43
LRRC28-205ENST00000558248 GRIN2BQ13224 1484 aa6.13□□□□□ -1.43
LRRC28-205ENST00000558248 TOP2AP11388 1531 aaKnown RBP6.13□□□□□ -1.43
LRRC28-205ENST00000558248 LOC100289279A0A1B0GTE1 492 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 MEGF11A6BM72 1044 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 CCDC88BA6NC98 1476 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 GSC2O15499 205 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 B3GALT4O96024 378 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
LRRC28-205ENST00000558248 MAPK8P45983 427 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 GRM2Q14416 872 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 ENOX2Q16206 610 aaKnown RBP6.12□□□□□ -1.43
LRRC28-205ENST00000558248 RPS26P11Q5JNZ5 115 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-205ENST00000558248 ZMYM1Q5SVZ6 1142 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 HGSNATQ68CP4 663 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 DTHD1Q6ZMT9 781 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 SLC51AQ86UW1 340 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 EPS8L3Q8TE67 593 aaKnown RBP6.12□□□□□ -1.43
LRRC28-205ENST00000558248 FBF1Q8TES7 1133 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 UBL7Q96S82 380 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-205ENST00000558248 CORO1BQ9BR76 489 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 ZNF576Q9H609 170 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 ABCB6Q9NP58 842 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 STOML1Q9UBI4 398 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 HIF3AQ9Y2N7 669 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 RAXQ9Y2V3 346 aa6.12□□□□□ -1.43
LRRC28-205ENST00000558248 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms