RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 NKX2-3Q8TAU0 364 aa26.39■■□□□ 1.82
RCCD1-208ENST00000557266 PCDHA7Q9UN72 937 aa26.39■■□□□ 1.82
RCCD1-208ENST00000557266 TBC1D2BQ9UPU7 963 aa26.39■■□□□ 1.82
RCCD1-208ENST00000557266 ERVV-1B6SEH8 477 aa26.39■■□□□ 1.81
RCCD1-208ENST00000557266 KINO60870 393 aaKnown RBP26.39■■□□□ 1.81
RCCD1-208ENST00000557266 IDH1O75874 414 aaKnown RBP26.39■■□□□ 1.81
RCCD1-208ENST00000557266 ARID4AP29374 1257 aaPredicted RBP26.39■■□□□ 1.81
RCCD1-208ENST00000557266 UBE3CQ15386 1083 aa26.39■■□□□ 1.81
RCCD1-208ENST00000557266 STX1AQ16623 288 aa26.39■■□□□ 1.81
RCCD1-208ENST00000557266 DZIP3Q86Y13 1208 aaKnown RBP26.39■■□□□ 1.81
RCCD1-208ENST00000557266 LRP5O75197 1615 aa26.39■■□□□ 1.81
RCCD1-208ENST00000557266 SPATA31A1Q5TZJ5 1347 aa26.39■■□□□ 1.81
RCCD1-208ENST00000557266 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.38■■□□□ 1.81
RCCD1-208ENST00000557266 SYTL4Q96C24 671 aaPredicted RBP26.38■■□□□ 1.81
RCCD1-208ENST00000557266 LINC00301Q8NCQ3 95 aa26.38■■□□□ 1.81
RCCD1-208ENST00000557266 MYRIPQ8NFW9 859 aa26.38■■□□□ 1.81
RCCD1-208ENST00000557266 THRAP3Q9Y2W1 955 aaKnown RBP26.38■■□□□ 1.81
RCCD1-208ENST00000557266 ZNF532Q9HCE3 1301 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 CPLX1O14810 134 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 PDE6AP16499 860 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 IL6STP40189 918 aaPredicted RBP26.37■■□□□ 1.81
RCCD1-208ENST00000557266 CCDC186Q7Z3E2 898 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 ZNF34Q8IZ26 560 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 PRIMPOLQ96LW4 560 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 GJB4Q9NTQ9 266 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 NUP98P52948 1817 aa26.37■■□□□ 1.81
RCCD1-208ENST00000557266 TCRBV5S4A2TA0A5A2 114 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 HSPA1LP34931 641 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 FMR1NBQ8N0W7 255 aaPredicted RBP26.36■■□□□ 1.81
RCCD1-208ENST00000557266 MRPS27Q92552 414 aaKnown RBP26.36■■□□□ 1.81
RCCD1-208ENST00000557266 NRBP1Q9UHY1 535 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 WWC3Q9ULE0 1092 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 CLIC4Q9Y696 253 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 POLR3DP05423 398 aaPredicted RBP26.36■■□□□ 1.81
RCCD1-208ENST00000557266 FGFR2P21802 821 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 PUM3Q15397 648 aaKnown RBP26.36■■□□□ 1.81
RCCD1-208ENST00000557266 CYB5R4Q7L1T6 521 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 FAM13BQ9NYF5 915 aa26.36■■□□□ 1.81
RCCD1-208ENST00000557266 A0A1W2PQ27 194 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 A0A1W2PQ64 194 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 A0A1W2PQD8 194 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 TRDNQ13061 729 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 ADALQ6DHV7 355 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 ANGEL1Q9UNK9 670 aaKnown RBP26.35■■□□□ 1.81
RCCD1-208ENST00000557266 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.35■■□□□ 1.81
RCCD1-208ENST00000557266 DRC7Q8IY82 874 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 HELBQ8NG08 1087 aaPredicted RBP26.35■■□□□ 1.81
RCCD1-208ENST00000557266 LPIN2Q92539 896 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 PDCL3Q9H2J4 239 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 POLR3EQ9NVU0 708 aa26.35■■□□□ 1.81
RCCD1-208ENST00000557266 SPATA31A5Q5VU36 1347 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 SPATA31A7Q8IWB4 1347 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 A0A087WWV3 80 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 KIF28PB7ZC32 967 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 EXOC5O00471 708 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 UQCRFS1P1P0C7P4 283 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 MYSM1Q5VVJ2 828 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 BRAPQ7Z569 592 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 CDCA7Q9BWT1 371 aaPredicted RBP26.34■■□□□ 1.81
RCCD1-208ENST00000557266 C4AP0C0L4 1744 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 C4BP0C0L5 1744 aa26.34■■□□□ 1.81
RCCD1-208ENST00000557266 MYO5AQ9Y4I1 1855 aaKnown RBP26.34■■□□□ 1.81
RCCD1-208ENST00000557266 SH2B2O14492 632 aaPredicted RBP26.33■■□□□ 1.81
RCCD1-208ENST00000557266 APPP05067 770 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 SARM1Q6SZW1 724 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 C8orf37Q96NL8 207 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 ZMYM6O95789 1325 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 MROH5Q6ZUA9 1318 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 YEATS4O95619 227 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 KIF23Q02241 960 aaPredicted RBP26.33■■□□□ 1.81
RCCD1-208ENST00000557266 LRMPQ12912 555 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 STK38Q15208 465 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 KCNG4Q8TDN1 519 aa26.33■■□□□ 1.81
RCCD1-208ENST00000557266 BCL9LQ86UU0 1499 aa26.33■■□□□ 1.8
RCCD1-208ENST00000557266 A0A1B0GVL5 298 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 GOLGA6L19H0YKK7 550 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 CDC25BP30305 580 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 NDUFA8P51970 172 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 NGLY1Q96IV0 654 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 STRBPQ96SI9 672 aaKnown RBP26.32■■□□□ 1.8
RCCD1-208ENST00000557266 CLIP2Q9UDT6 1046 aa26.32■■□□□ 1.8
RCCD1-208ENST00000557266 DHX40Q8IX18 779 aaKnown RBP26.32■■□□□ 1.8
RCCD1-208ENST00000557266 ERCC4Q92889 916 aaPredicted RBP26.32■■□□□ 1.8
RCCD1-208ENST00000557266 FNBP4Q8N3X1 1017 aaPredicted RBP26.31■■□□□ 1.8
RCCD1-208ENST00000557266 ANO10Q9NW15 660 aa26.31■■□□□ 1.8
RCCD1-208ENST00000557266 NEDD4P46934 1319 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 SPTLC2O15270 562 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 METAP2P50579 478 aaKnown RBP eCLIP26.3■■□□□ 1.8
RCCD1-208ENST00000557266 SF3A1Q15459 793 aaKnown RBP26.3■■□□□ 1.8
RCCD1-208ENST00000557266 SENP2Q9HC62 589 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 ARAP2Q8WZ64 1704 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 B4E1Z4 1266 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 SPATA5Q8NB90 893 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 AIDAQ96BJ3 306 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 AK7Q96M32 723 aa26.3■■□□□ 1.8
RCCD1-208ENST00000557266 KAT6BQ8WYB5 2073 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 SNAP23O00161 211 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 EIF5P55010 431 aaKnown RBP26.29■■□□□ 1.8
RCCD1-208ENST00000557266 CCDC144BQ3MJ40 725 aa26.29■■□□□ 1.8
RCCD1-208ENST00000557266 SUSD4Q5VX71 490 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms