RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MCM5P33992 734 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 GYG1P46976 350 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 EVCP57679 992 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 RALYLQ86SE5 291 aaKnown RBP11.92□□□□□ -0.5
TMEM260-211ENST00000556648 SLC51AQ86UW1 340 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 CARMIL3Q8ND23 1372 aa11.92□□□□□ -0.5
TMEM260-211ENST00000556648 GNPATO15228 680 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 PHF14O94880 888 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 LCORLQ8N3X6 602 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 CELF1Q92879 486 aaKnown RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 AIDAQ96BJ3 306 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 SPATA32Q96LK8 384 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 ELP1O95163 1332 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 CHD4Q14839 1912 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 TNRC6CQ9HCJ0 1690 aaKnown RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 TIAM2Q8IVF5 1701 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 ECM29Q5VYK3 1845 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 TAF1LQ8IZX4 1826 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 KLRK1P26718 216 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 ADD1P35611 737 aaKnown RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 ANKRD18AQ8IVF6 992 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 TRIM44Q96DX7 344 aaPredicted RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
TMEM260-211ENST00000556648 FUCA2Q9BTY2 467 aa11.91□□□□□ -0.5
TMEM260-211ENST00000556648 B4E1Z4 1266 aa11.9□□□□□ -0.5
TMEM260-211ENST00000556648 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 HMGN5P82970 282 aaKnown RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 CEBPZQ03701 1054 aaKnown RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 MAP3K12Q12852 859 aa11.9□□□□□ -0.5
TMEM260-211ENST00000556648 NAA16Q6N069 864 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 ADGRA1Q86SQ6 560 aa11.9□□□□□ -0.5
TMEM260-211ENST00000556648 MIGA1Q8NAN2 632 aa11.9□□□□□ -0.5
TMEM260-211ENST00000556648 ANP32BQ92688 251 aaKnown RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
TMEM260-211ENST00000556648 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
TMEM260-211ENST00000556648 LY75O60449 1722 aa11.9□□□□□ -0.51
TMEM260-211ENST00000556648 GSG1L2A8MUP6 293 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 ESPNB1AK53 854 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 SH2B2O14492 632 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-211ENST00000556648 RPS6KA4O75676 772 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 RXRAP19793 462 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 KCNA4P22459 653 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 IFNL3Q8IZI9 196 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 GJB4Q9NTQ9 266 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 MINPP1Q9UNW1 487 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 SBF2Q86WG5 1849 aa11.89□□□□□ -0.51
TMEM260-211ENST00000556648 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
TMEM260-211ENST00000556648 PATL2C9JE40 543 aaKnown RBP11.88□□□□□ -0.51
TMEM260-211ENST00000556648 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-211ENST00000556648 CACNA1SQ13698 1873 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 ALX1Q15699 326 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 CAMK4Q16566 473 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 STK11IPQ8N1F8 1099 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 WDR19Q8NEZ3 1342 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 NAPBQ9H115 298 aa11.88□□□□□ -0.51
TMEM260-211ENST00000556648 ZSCAN16Q9H4T2 348 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-211ENST00000556648 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
TMEM260-211ENST00000556648 SMIM22K7EJ46 135 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 SLC10A5Q5PT55 438 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 RC3H1Q5TC82 1133 aaKnown RBP11.87□□□□□ -0.51
TMEM260-211ENST00000556648 NBPF5PQ86XG9 351 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-211ENST00000556648 AIFM3Q96NN9 605 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 USP28Q96RU2 1077 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 DACT1Q9NYF0 836 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 LRP2BPQ9P2M1 347 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 SLC4A4Q9Y6R1 1079 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 SPATA31A6Q5VVP1 1343 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 NR1I2O75469 434 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 LETM1O95202 739 aaPredicted RBP11.87□□□□□ -0.51
TMEM260-211ENST00000556648 CYP7A1P22680 504 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 TRDNQ13061 729 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 ARHGEF1Q92888 912 aaKnown RBP11.87□□□□□ -0.51
TMEM260-211ENST00000556648 ABCF2Q9UG63 623 aa11.87□□□□□ -0.51
TMEM260-211ENST00000556648 ANGEL1Q9UNK9 670 aaKnown RBP11.87□□□□□ -0.51
TMEM260-211ENST00000556648 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 KDM4AO75164 1064 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 ZPR1O75312 459 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 CDC27P30260 824 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 IGDCC4Q8TDY8 1250 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 ZNF384Q8TF68 577 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 SETDB2Q96T68 719 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 NUP62CLQ9H1M0 184 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 ORC3Q9UBD5 711 aaPredicted RBP11.86□□□□□ -0.51
TMEM260-211ENST00000556648 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
TMEM260-211ENST00000556648 TDO2P48775 406 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms