RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 DPF2Q92785 391 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 RSPH6AQ9H0K4 717 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 DBNDD1Q9H9R9 158 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 TIMELESSQ9UNS1 1208 aa7.14□□□□□ -1.27
HOXB3-213ENST00000552000 FCF1Q9Y324 198 aaKnown RBP7.14□□□□□ -1.27
HOXB3-213ENST00000552000 ASTN2O75129 1339 aaPredicted RBP7.13□□□□□ -1.27
HOXB3-213ENST00000552000 BBOX1O75936 387 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 TBC1D8O95759 1140 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 HCLS1P14317 486 aaPredicted RBP7.13□□□□□ -1.27
HOXB3-213ENST00000552000 PTGDRQ13258 359 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 PARP10Q53GL7 1025 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 GIGYF2Q6Y7W6 1299 aaKnown RBP7.13□□□□□ -1.27
HOXB3-213ENST00000552000 RASAL3Q86YV0 1011 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 SULF1Q8IWU6 871 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 CDCA5Q96FF9 252 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 UTP14AQ9BVJ6 771 aaKnown RBP7.13□□□□□ -1.27
HOXB3-213ENST00000552000 GGA3Q9NZ52 723 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 TTC28Q96AY4 2481 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 ANKRD36CQ5JPF3 1778 aa7.13□□□□□ -1.27
HOXB3-213ENST00000552000 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
HOXB3-213ENST00000552000 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
HOXB3-213ENST00000552000 GRAPQ13588 217 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 KIF4BQ2VIQ3 1234 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 SLC10A5Q5PT55 438 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 FBXO46Q6PJ61 603 aaPredicted RBP7.12□□□□□ -1.27
HOXB3-213ENST00000552000 DDX46Q7L014 1031 aaKnown RBP7.12□□□□□ -1.27
HOXB3-213ENST00000552000 GRAPLQ8TC17 118 aaPredicted RBP7.12□□□□□ -1.27
HOXB3-213ENST00000552000 KCNQ5Q9NR82 932 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 COL6A3P12111 3177 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 DUOX1Q9NRD9 1551 aa7.12□□□□□ -1.27
HOXB3-213ENST00000552000 DLG5Q8TDM6 1919 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 RTL9Q8NET4 1388 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 GPR25O00155 361 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 U2AF1L5P0DN76 240 aaPredicted RBP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 RPS12P25398 132 aaKnown RBP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 FXR1P51114 621 aaKnown RBP eCLIP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 U2AF1Q01081 240 aaKnown RBP eCLIP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 WASHC4Q2M389 1173 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 MOB2Q70IA6 237 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 THUMPD2Q9BTF0 503 aaKnown RBP7.11□□□□□ -1.27
HOXB3-213ENST00000552000 SENP2Q9HC62 589 aa7.11□□□□□ -1.27
HOXB3-213ENST00000552000 UBE2Q2LH0YL09 131 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 C6orf229H3BNL8 230 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 HTATSF1O43719 755 aaKnown RBP7.1□□□□□ -1.27
HOXB3-213ENST00000552000 ECE2O60344 883 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 ANXA1P04083 346 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 EIF4A1P60842 406 aaKnown RBP7.1□□□□□ -1.27
HOXB3-213ENST00000552000 ZNF428Q96B54 188 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 CFAP53Q96M91 514 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 R3HDMLQ9H3Y0 253 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 ATP13A2Q9NQ11 1180 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 NSFL1CQ9UNZ2 370 aaKnown RBP7.1□□□□□ -1.27
HOXB3-213ENST00000552000 NUDCQ9Y266 331 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 KDM3BQ7LBC6 1761 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 PAPPA2Q9BXP8 1791 aa7.1□□□□□ -1.27
HOXB3-213ENST00000552000 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 FKTNO75072 461 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 FKBP1BP68106 108 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 SCARF1Q14162 830 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 PROSER3Q2NL68 480 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 ANGEL2Q5VTE6 544 aaKnown RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 TMC4Q7Z404 712 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 PNISRQ8TF01 805 aaKnown RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 POLLQ9UGP5 575 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 TRMT112Q9UI30 125 aaKnown RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 SCAF8Q9UPN6 1271 aaKnown RBP7.09□□□□□ -1.27
HOXB3-213ENST00000552000 LRRC37AA6NMS7 1700 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 NCOR1O75376 2440 aa7.09□□□□□ -1.27
HOXB3-213ENST00000552000 ERBB4Q15303 1308 aa7.08□□□□□ -1.28
HOXB3-213ENST00000552000 SH3TC1Q8TE82 1336 aa7.08□□□□□ -1.28
HOXB3-213ENST00000552000 DDX60Q8IY21 1712 aaKnown RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 VIL1P09327 827 aaKnown RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 SNRPBP14678 240 aaKnown RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 EIF2S2P20042 333 aaKnown RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 MLLT3P42568 568 aaPredicted RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 TM4SF4P48230 202 aa7.08□□□□□ -1.28
HOXB3-213ENST00000552000 GPSM2P81274 684 aa7.08□□□□□ -1.28
HOXB3-213ENST00000552000 LRP10Q7Z4F1 713 aa7.08□□□□□ -1.28
HOXB3-213ENST00000552000 CELF1Q92879 486 aaKnown RBP7.08□□□□□ -1.28
HOXB3-213ENST00000552000 LAMA3Q16787 3333 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 PSME4Q14997 1843 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-213ENST00000552000 OATP04181 439 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 ZNF280AP59817 542 aaPredicted RBP7.07□□□□□ -1.28
HOXB3-213ENST00000552000 AIMP1Q12904 312 aaKnown RBP7.07□□□□□ -1.28
HOXB3-213ENST00000552000 HSP90AB3PQ58FF7 597 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
HOXB3-213ENST00000552000 TBC1D16Q8TBP0 767 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 TRIM47Q96LD4 638 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 EYA3Q99504 573 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 TRIM17Q9Y577 477 aa7.07□□□□□ -1.28
HOXB3-213ENST00000552000 COL4A1P02462 1669 aa7.06□□□□□ -1.28
HOXB3-213ENST00000552000 RBBP6Q7Z6E9 1792 aaKnown RBP7.06□□□□□ -1.28
HOXB3-213ENST00000552000 UFL1O94874 794 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms